RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 TBKBP1A7MCY6 615 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 FXYD1O00168 92 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 IFNA8P32881 189 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 RGS7P49802 495 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 CCNA1P78396 465 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 POU5F1BQ06416 359 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 SELPLGQ14242 412 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 SNAP47Q5SQN1 464 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 SPNS2Q8IVW8 549 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 CCDC103Q8IW40 242 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 GPR78Q96P69 363 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 AS3MTQ9HBK9 375 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 ITM2CQ9NQX7 267 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 VANGL2Q9ULK5 521 aa20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 MAFBQ9Y5Q3 323 aaPredicted RBP20.56■□□□□ 0.88
TMEFF1-201ENST00000374879 TEX28O15482 410 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 THRBP10828 461 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 MYCLP1P12525 358 aaPredicted RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 PTPRAP18433 802 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 GPX3P22352 226 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 FSHRP23945 695 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ARL2P36404 184 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 SLC26A2P50443 739 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 CLCNKBP51801 687 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ZNF280AP59817 542 aaPredicted RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 STRADAQ7RTN6 431 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 PIWIL4Q7Z3Z4 852 aaKnown RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 SLC22A15Q8IZD6 547 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 SDR16C5Q8N3Y7 309 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ELMO2Q96JJ3 720 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 CSPG4P5Q96PW8 444 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 TEX13BQ9BXU2 312 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 CYP4F12Q9HCS2 524 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 PAK1IP1Q9NWT1 392 aaPredicted RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 KRT19P08727 400 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ALDOCP09972 364 aaKnown RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 SDC4P31431 198 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ALDH3A2P51648 485 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 NCS1P62166 190 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 NEK10Q6ZWH5 1172 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ZC3HC1Q86WB0 502 aaKnown RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 CLEC4FQ8N1N0 589 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 MINDY1Q8N5J2 469 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 PAPD5Q8NDF8 572 aaKnown RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 FAM83FQ8NEG4 500 aaPredicted RBP20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 UBXN10Q96LJ8 280 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 NODALQ96S42 347 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 CHID1Q9BWS9 393 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 NTN4Q9HB63 628 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 ADAMTS5Q9UNA0 930 aa20.55■□□□□ 0.88
TMEFF1-201ENST00000374879 RLFQ13129 1914 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 MAGEB16A2A368 324 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 CHRNA1P02708 482 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 CAPN3P20807 821 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 TPD52P55327 224 aaPredicted RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 GALK2Q01415 458 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 UGT3A2Q3SY77 523 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 CERCAMQ5T4B2 595 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ZNF772Q68DY9 489 aaPredicted RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ZCCHC8Q6NZY4 707 aaKnown RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 SPATC1Q76KD6 591 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 DNAAF3Q8N9W5 541 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ZNF560Q96MR9 790 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 TOR3AQ9H497 397 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 NECTIN3Q9NQS3 549 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 QPCTLQ9NXS2 382 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ZNF221Q9UK13 617 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ACOT9Q9Y305 439 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 PHIPQ8WWQ0 1821 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 AREL1O15033 823 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 DAB1O75553 588 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 BDNFP23560 247 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 KIF19Q2TAC6 998 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 PRAMEF18Q5VWM3 479 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 LAIR2Q6ISS4 152 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 CUZD1Q86UP6 607 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 CEP97Q8IW35 865 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 ZNF567Q8N184 647 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 HEXIM2Q96MH2 286 aaKnown RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 RNF145Q96MT1 663 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 KCTD15Q96SI1 283 aaPredicted RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 BDH2Q9BUT1 245 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 SLIRPQ9GZT3 109 aaKnown RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 DDX28Q9NUL7 540 aaKnown RBP20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 WDR70Q9NW82 654 aa20.54■□□□□ 0.88
TMEFF1-201ENST00000374879 PGK1P00558 417 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 ALPLP05186 524 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 TGFBR1P36897 503 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 EMX1Q04741 257 aaPredicted RBP20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 DAG1Q14118 895 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 DPYSL2Q16555 572 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 CLEC6AQ6EIG7 209 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 PRMT9Q6P2P2 845 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 CYHR1Q6ZMK1 362 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 LARP4Q71RC2 724 aaKnown RBP eCLIP20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 FAR1Q8WVX9 515 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 TMEM176AQ96HP8 235 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 IRF2BPLQ9H1B7 796 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 FAM49BQ9NUQ9 324 aa20.53■□□□□ 0.88
TMEFF1-201ENST00000374879 ADPRHL2Q9NX46 363 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms