RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 PFKFB4Q16877 469 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 ZRANB3Q5FWF4 1079 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 KDM1BQ8NB78 822 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 NRG4Q8WWG1 115 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 FKBPLQ9UIM3 349 aa18.27■□□□□ 0.51
RXRB-202ENST00000374685 PAPSS2O95340 614 aaPredicted RBP18.26■□□□□ 0.51
RXRB-202ENST00000374685 CXCL10P02778 98 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 ITGB8P26012 769 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 NME5P56597 212 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 CXorf57Q6NSI4 855 aaKnown RBP18.26■□□□□ 0.51
RXRB-202ENST00000374685 SPATA16Q9BXB7 569 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 CCDC68Q9H2F9 335 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 SORCS3Q9UPU3 1222 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 PTGDR2Q9Y5Y4 395 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 BACE2Q9Y5Z0 518 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 MAGEC1O60732 1142 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 SRP72O76094 671 aaKnown RBP18.26■□□□□ 0.51
RXRB-202ENST00000374685 INHBCP55103 352 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 SH3BGRP55822 239 aaPredicted RBP18.26■□□□□ 0.51
RXRB-202ENST00000374685 NSUN2Q08J23 767 aaKnown RBP eCLIP18.26■□□□□ 0.51
RXRB-202ENST00000374685 GSTA3Q16772 222 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 TAS2R42Q7RTR8 314 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 CUZD1Q86UP6 607 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 DDI1Q8WTU0 396 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 ESAMQ96AP7 390 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 RCN3Q96D15 328 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 YME1L1Q96TA2 773 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 GALPQ9UBC7 116 aa18.26■□□□□ 0.51
RXRB-202ENST00000374685 H3BMM5 538 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 NDUFS3O75489 264 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 ALPIP09923 528 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 GFAPP14136 432 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 TCN1P20061 433 aaPredicted RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 PKNOX1P55347 436 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 RHOAP61586 193 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 SULT2A1Q06520 285 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 PIWIL4Q7Z3Z4 852 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 ISCA2Q86U28 154 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 TADA1Q96BN2 335 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 TMA16Q96EY4 203 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 POLR3BQ9NW08 1133 aaPredicted RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 GIMAP2Q9UG22 337 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 COMMD3-BMI1R4GMX3 469 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 ZBBXA8MT70 800 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 IQCF5A8MTL0 148 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 ABLIM3O94929 683 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 CRTAMO95727 393 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 PRLP01236 227 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 GABRR2P28476 465 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 CSKP41240 450 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 C1QTNF8P60827 252 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 TRAF2Q12933 501 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 ZRSR2Q15696 482 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 PSAPL1Q6NUJ1 521 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 PAQR3Q6TCH7 311 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 PIANPQ8IYJ0 282 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 PTGR2Q8N8N7 351 aaPredicted RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 PLD4Q96BZ4 506 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 NSUN5Q96P11 429 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 KLF16Q9BXK1 252 aaPredicted RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 TDRD1Q9BXT4 1180 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 UTP6Q9NYH9 597 aaKnown RBP18.25■□□□□ 0.51
RXRB-202ENST00000374685 PPM1HQ9ULR3 514 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 ARHGAP26Q9UNA1 814 aa18.25■□□□□ 0.51
RXRB-202ENST00000374685 STX16-NPEPL1H3BU86 382 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 TEX28O15482 410 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 PRAMEF12O95522 483 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 RBP1P09455 135 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 RAP1GDS1P52306 607 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 EPHB3P54753 998 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 OR4D1Q15615 310 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 PTPRNQ16849 979 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 TMEM150AQ86TG1 271 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 HS6ST3Q8IZP7 471 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 UBXN10Q96LJ8 280 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 TRIB3Q96RU7 358 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 NPAS2Q99743 824 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 SLX1AQ9BQ83 275 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 OGDHLQ9ULD0 1010 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 INSL5Q9Y5Q6 135 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 ILVBLA1L0T0 632 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 C2orf81A6NN90 581 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 MYL4P12829 197 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 PFKPQ01813 784 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 ACAP2Q15057 778 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 FAM45BPQ6NSW5 357 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 DCBLD1Q8N8Z6 715 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 FAM45AQ8TCE6 357 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 VWCEQ96DN2 955 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 RPL10LQ96L21 214 aaKnown RBP18.24■□□□□ 0.51
RXRB-202ENST00000374685 NR1H4Q96RI1 486 aaPredicted RBP18.24■□□□□ 0.51
RXRB-202ENST00000374685 TLR9Q9NR96 1032 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 COMMD8Q9NX08 183 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 CIDEBQ9UHD4 219 aa18.24■□□□□ 0.51
RXRB-202ENST00000374685 UBFD1O14562 309 aaKnown RBP18.23■□□□□ 0.51
RXRB-202ENST00000374685 STX7O15400 261 aaKnown RBP18.23■□□□□ 0.51
RXRB-202ENST00000374685 MC4RP32245 332 aa18.23■□□□□ 0.51
RXRB-202ENST00000374685 STC1P52823 247 aa18.23■□□□□ 0.51
RXRB-202ENST00000374685 PRKAA2P54646 552 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms