RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 H3BMM5 538 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 CHUKO15111 745 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 SNUPNO95149 360 aaKnown RBP19.53■□□□□ 0.72
HDAC1-201ENST00000373548 CYBBP04839 570 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 JUNP05412 331 aaKnown RBP19.53■□□□□ 0.72
HDAC1-201ENST00000373548 SP100P23497 879 aaPredicted RBP19.53■□□□□ 0.72
HDAC1-201ENST00000373548 XIAPP98170 497 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 ZRANB3Q5FWF4 1079 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 METTL21CQ5VZV1 264 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 PHTF2Q8N3S3 785 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 PPP1R36Q96LQ0 422 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 BIRC8Q96P09 236 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 C17orf80Q9BSJ5 609 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 GPR63Q9BZJ6 419 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 CCDC68Q9H2F9 335 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 TNKS2Q9H2K2 1166 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 DENND2DQ9H6A0 471 aaPredicted RBP19.53■□□□□ 0.72
HDAC1-201ENST00000373548 FAM50BQ9Y247 325 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 SCN8AQ9UQD0 1980 aa19.53■□□□□ 0.72
HDAC1-201ENST00000373548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 NEMP1O14524 444 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 HTRA2O43464 458 aaPredicted RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 PTPN2P17706 415 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 GM2AP17900 193 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 CTSOP43234 321 aaPredicted RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 TTPAP49638 278 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 BCL2L1Q07817 233 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 PTPRNQ16849 979 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 PITRM1Q5JRX3 1037 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 DGKKQ5KSL6 1271 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 RPS27LQ71UM5 84 aaKnown RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 RYBPQ8N488 228 aaPredicted RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 STON2Q8WXE9 905 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 HERVK_113Q902F9 699 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 MCUR1Q96AQ8 359 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 TAS2R13Q9NYV9 303 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 RPL26L1Q9UNX3 145 aaKnown RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 F8W8V4 182 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 DCXO43602 365 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 OR1I1O60431 355 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 EN2P19622 333 aaPredicted RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 EPHA3P29320 983 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 HLA-FP30511 346 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 IRS1P35568 1242 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 HMGCLP35914 325 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 OR4D1Q15615 310 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 SLC5A9Q2M3M2 681 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 LSM12Q3MHD2 195 aaKnown RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 SH2D4BQ5SQS7 431 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 PAQR3Q6TCH7 311 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 TMEM25Q86YD3 366 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 POU5F2Q8N7G0 328 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 MICAL1Q8TDZ2 1067 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 RPL10LQ96L21 214 aaKnown RBP19.52■□□□□ 0.72
HDAC1-201ENST00000373548 VPS9D1Q9Y2B5 631 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 PKP3Q9Y446 797 aa19.52■□□□□ 0.72
HDAC1-201ENST00000373548 LINC01553A4QN01 128 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 FGF19O95750 216 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 IGSF6O95976 241 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 RHOP08100 348 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 IMPDH1P20839 514 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 DDX6P26196 483 aaKnown RBP eCLIP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 MAPK8P45983 427 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 STK19P49842 368 aaPredicted RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 MNAT1P51948 309 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 RPL26P61254 145 aaKnown RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 NFKB2Q00653 900 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 SULT2A1Q06520 285 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 WASHC2DQ5SRD0 308 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 FRMD7Q6ZUT3 714 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 METTL3Q86U44 580 aaKnown RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 L3HYPDHQ96EM0 354 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 MMADHCQ9H3L0 296 aaPredicted RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 GSTO2Q9H4Y5 243 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 SYTL2Q9HCH5 934 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 GTSE1Q9NYZ3 720 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 GALPQ9UBC7 116 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 PLA2G4CQ9UP65 541 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 GPR39O43194 453 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 SOCS5O75159 536 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 PENKP01210 267 aaPredicted RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 SRCP12931 536 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 PKMP14618 531 aaKnown RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 EPCAMP16422 314 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 CAMK1Q14012 370 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 PDCD2Q16342 344 aaPredicted RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 FUT11Q495W5 492 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 CTSL3PQ5NE16 218 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 ASTLQ6HA08 431 aaPredicted RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 PHOSPHO2Q8TCD6 241 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 EXT2Q93063 718 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 VOPP1Q96AW1 172 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 GPR21Q99679 349 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 TFB2MQ9H5Q4 396 aaKnown RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 TNFRSF12AQ9NP84 129 aa19.51■□□□□ 0.71
HDAC1-201ENST00000373548 OAS3Q9Y6K5 1087 aaKnown RBP19.51■□□□□ 0.71
HDAC1-201ENST00000373548 A0A0J9YYE9 177 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 MEI4A8MW99 385 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 TRBC1P01850 177 aa19.5■□□□□ 0.71
HDAC1-201ENST00000373548 CCND1P24385 295 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms