RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 CPNE3O75131 537 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 JCHAINP01591 159 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZNF268Q14587 947 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 CNSTQ6PJW8 725 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 TMC3Q7Z5M5 1100 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 TRIM43Q96BQ3 446 aaPredicted RBP14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 SRRDQ9UH36 339 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 LNPEPQ9UIQ6 1025 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 SORCS3Q9UPU3 1222 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 SLC45A1Q9Y2W3 748 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 RBM7Q9Y580 266 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 UNCXA6NJT0 531 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 AIPO00170 330 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 NCAM2O15394 837 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 VPS4BO75351 444 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 PROCP04070 461 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 RFX4Q33E94 735 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 PNO1Q9NRX1 252 aaKnown RBP14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 THAP1Q9NVV9 213 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 PCDHGA11Q9Y5H2 935 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 NPIPA7E9PJI5 369 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 LGR5O75473 907 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 NPIPA8P0DM63 369 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 GRM5P41594 1212 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 RFX3P48380 749 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 UGCGQ16739 394 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZNF697Q5TEC3 545 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 FBXL19Q6PCT2 694 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 TNS4Q8IZW8 715 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 AADATQ8N5Z0 425 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 SLC38A2Q96QD8 506 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 CAPN10Q9HC96 672 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 PADI3Q9ULW8 664 aa14.05□□□□□ -0.16
RAPGEF1-202ENST00000372190 CLCA1A8K7I4 914 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 TRIM38O00635 465 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 SERPINE1P05121 402 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 PPP2R2BQ00005 443 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 SLC6A3Q01959 620 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 SEMA3AQ14563 771 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 FOXR1Q6PIV2 292 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 SEMA4AQ9H3S1 761 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZDHHC6Q9H6R6 413 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 VPS26AO75436 327 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ACRP10323 421 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 GCNT1Q02742 428 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 C1QBPQ07021 282 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 PSRC1Q6PGN9 363 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 SMG7Q92540 1137 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 NOL11Q9H8H0 719 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 MAN1C1Q9NR34 630 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 CENPBD1B2RD01 187 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 PLK4O00444 970 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 B3GALNT1O75752 331 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 UNC5CO95185 931 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 CYP4F2P78329 520 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 CYP4F3Q08477 520 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ATAT1Q5SQI0 421 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 GRHL2Q6ISB3 625 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 TCEAL3Q969E4 200 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZNF471Q9BX82 626 aaPredicted RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 KCTD10Q9H3F6 313 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 RBM22Q9NW64 420 aaKnown RBP eCLIP14.04□□□□□ -0.169e-6■□□□□ 9.6
RAPGEF1-202ENST00000372190 OR6C70A6NIJ9 312 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR6C75A6NL08 312 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 B4GALT5O43286 388 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 RBMXL2O75526 392 aaKnown RBP14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 PSEN1P49768 467 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 MGAT5Q09328 741 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZZZ3Q8IYH5 903 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 ZNF567Q8N184 647 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 TCTEX1D2Q8WW35 142 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 CCDC3Q9BQI4 270 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 MIR1-1HGQ9H1L0 117 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
RAPGEF1-202ENST00000372190 IPO13O94829 963 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 BCL2L1Q07817 233 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TBX2Q13207 712 aaPredicted RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 ARMC8Q8IUR7 673 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 HAS1Q92839 578 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 PTCD3Q96EY7 689 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 FADS3Q9Y5Q0 445 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TISP43B9A030 160 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 OR5F1O95221 314 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 RLN2P04090 185 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 NFKB1P19838 968 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 FAM153CQ494X1 144 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 DAW1Q8N136 415 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 MYO1HQ8N1T3 1032 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 PHC3Q8NDX5 983 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TCF12Q99081 682 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 TMEM121Q9BTD3 319 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 CHRAC1Q9NRG0 131 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 BLOC1S4Q9NUP1 217 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 VANGL2Q9ULK5 521 aa14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 AFDNP55196 1824 aaKnown RBP14.03□□□□□ -0.16
RAPGEF1-202ENST00000372190 PROSCO94903 275 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms