RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 TBC1D3DA0A087WVF3 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3IA0A087WXS9 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3EA0A087X179 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3KA0A087X1G2 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3FA6NER0 549 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3LB9A6J9 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MYL12BO14950 172 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3HP0C7X1 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ADSSP30520 456 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SMU1Q2TAY7 513 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TTC23Q5W5X9 447 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3GQ6DHY5 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3CQ6IPX1 549 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TBC1D3Q8IZP1 549 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 PRDM12Q9H4Q4 367 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MORF4L1Q9UBU8 362 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ING4Q9UNL4 249 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 CACNB4O00305 520 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 CTPS1P17812 591 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ATF6P18850 670 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 CDH3P22223 829 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 RPL7AP62424 266 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TNK2Q07912 1038 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TCEA2Q15560 299 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 STRADAQ7RTN6 431 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SPAG16Q8N0X2 631 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 OR7A2PQ8NGA2 310 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ING5Q8WYH8 240 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 EXOC2Q96KP1 924 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 FRMD6Q96NE9 622 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 IKZF4Q9H2S9 585 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 PNPLA3Q9NST1 481 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 RCCD1A6NED2 376 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 NOS1APO75052 506 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MYL12AP19105 171 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 PPP2R1BP30154 601 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ATP13A4Q4VNC1 1196 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 CHST9Q7L1S5 443 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TPD52L3Q96J77 140 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SPACA7Q96KW9 195 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 FAM124BQ9H5Z6 455 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ARMC7Q9H6L4 198 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 CLIC5Q9NZA1 410 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 BTBD3Q9Y2F9 522 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 RGSL1A5PLK6 1076 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 TUBAL3A6NHL2 446 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 RGS14O43566 566 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 BUD23O43709 281 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MAGEC1O60732 1142 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 ELFN1P0C7U0 828 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SYN1P17600 705 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 NRG3P56975 720 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 B3GNT5Q9BYG0 378 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 HBS1LQ9Y450 684 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MTF2Q9Y483 593 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 LRRC37A3O60309 1634 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 EPHB6O15197 1021 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SEC22BO75396 215 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 PABPC1P11940 636 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MAXP61244 160 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 HSPA14Q0VDF9 509 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 GPM6BQ13491 265 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 GALNT3Q14435 633 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 GDF6Q6KF10 455 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 RP9Q8TA86 221 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 MAGEE2Q8TD90 523 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 DMTF1Q9Y222 760 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 PCYT1BQ9Y5K3 369 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 AK5Q9Y6K8 562 aa13.31□□□□□ -0.28
RAPGEF1-201ENST00000372189 SNAP91O60641 907 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 CST3P01034 146 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 BMP6P22004 513 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 JAK1P23458 1154 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 RPS6KA3P51812 740 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 FOLH1Q04609 750 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ECHDC2Q86YB7 292 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 METTL6Q8TCB7 284 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 BAP1Q92560 729 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 TMEM168Q9H0V1 697 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ANKDD1BA6NHY2 528 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 NTRK1P04629 796 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 STOMP27105 288 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 C1orf189Q5VU69 101 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PRSS55Q6UWB4 352 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ISLR2Q6UXK2 745 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 NKAPQ8N5F7 415 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PRELID2Q8N945 189 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 KREMEN2Q8NCW0 462 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 ACMSDQ8TDX5 336 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 S100ZQ8WXG8 99 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PTCD3Q96EY7 689 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 FGFBP2Q9BYJ0 223 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 PHACTR1Q9C0D0 580 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 SPAG4Q9NPE6 437 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 CRNNQ9UBG3 495 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
RAPGEF1-201ENST00000372189 MDM4O15151 490 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms