RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 AHCYL2Q96HN2 611 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 MRPL57Q9BQC6 102 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TLR8Q9NR97 1041 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 RBM22Q9NW64 420 aaKnown RBP eCLIP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 MAN2B2Q9Y2E5 1009 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 ACTR3P61158 418 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 LHFPL3Q86UP9 236 aa15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 C7orf50Q9BRJ6 194 aaKnown RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF335Q9H4Z2 1342 aaPredicted RBP15.29■□□□□ 0.04
GTF3C4-201ENST00000372146 UPP2O95045 317 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 PEX2P28328 305 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 VANGL1Q8TAA9 524 aaPredicted RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 POP1Q99575 1024 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ETNK2Q9NVF9 386 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 LSM8O95777 96 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 GZMAP12544 262 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 CHST15Q7LFX5 561 aaPredicted RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 DCP1BQ8IZD4 617 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ADCY4Q8NFM4 1077 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 MFSD8Q8NHS3 518 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 CLP1Q92989 425 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 NXPE2Q96DL1 559 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 FEM1AQ9BSK4 669 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 EBF3Q9H4W6 596 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 PCDH18Q9HCL0 1135 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 CCDC88AQ3V6T2 1871 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 SLC22A3O75751 556 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 CRADDP78560 199 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 FSTL1Q12841 308 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ASTN2O75129 1339 aaPredicted RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 GMFGO60234 142 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 MPZL2O60487 215 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 PTPN3P26045 913 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ACSL1P33121 698 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 EFEMP1Q12805 493 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ASB18Q6ZVZ8 466 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 SLC16A9Q7RTY1 509 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ADGRG2Q8IZP9 1017 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 C11orf65Q8NCR3 313 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 OR52J3Q8NH60 311 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 CELF6Q96J87 481 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 COMMD4Q9H0A8 199 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 OR10H1Q9Y4A9 318 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 H0YJX3 145 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 LRG1P02750 347 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 AQP1P29972 269 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 PNPLA4P41247 253 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 MTA1Q13330 715 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ADAM15Q13444 863 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 SGMS1Q86VZ5 419 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ERI1Q8IV48 349 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 DCP1AQ9NPI6 582 aaPredicted RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 AIMP2Q13155 320 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 PDE10AQ9Y233 779 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 URB1O60287 2271 aaKnown RBP15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 RAB4AP20338 218 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 SDR16C5Q8N3Y7 309 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 IL22Q9GZX6 179 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 ERVK-5Q9HDB9 667 aa15.28■□□□□ 0.04
GTF3C4-201ENST00000372146 A0A1B0GVC2 190 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 RIIAD1A6NNX1 92 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 HSBP1L1C9JCN9 74 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 LTA4HP09960 611 aaKnown RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 NAGLUP54802 743 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 EFCAB12Q6NXP0 572 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 CNOT6Q9ULM6 557 aaKnown RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 ASF1AQ9Y294 204 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 M0R233 179 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 CRTC2Q53ET0 693 aaPredicted RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 LAPTM4BQ86VI4 370 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 ADGRF2Q8IZF7 708 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 TRPM4Q8TD43 1214 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 QRFPRQ96P65 431 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 SEC14L4Q9UDX3 406 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 POLR3HQ9Y535 204 aaPredicted RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 TLX1P31314 330 aaPredicted RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 MARC1Q5VT66 337 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 PAQR7Q86WK9 346 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 EXOC2Q96KP1 924 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF570Q96NI8 536 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 OIP5O43482 229 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 ZNF81P51508 661 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 GAL3ST1Q99999 423 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 EIF5A2Q9GZV4 153 aaKnown RBP15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 PSME2Q9UL46 239 aa15.27■□□□□ 0.04
GTF3C4-201ENST00000372146 RPL3P39023 403 aaKnown RBP15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 XKR3Q5GH77 459 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 C3orf58Q8NDZ4 430 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 ATP7BP35670 1465 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 C13orf42A0A1B0GVH6 325 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 IFNA2P01563 188 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 ACADMP11310 421 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 ARCN1P48444 511 aaKnown RBP15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 GNG2P59768 71 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 ZCCHC12Q6PEW1 402 aa15.27■□□□□ 0.03
GTF3C4-201ENST00000372146 OR10H4Q8NGA5 316 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms