RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TAS2R1Q9NYW7 299 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 EGFL7Q9UHF1 273 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 AK5Q9Y6K8 562 aa11.84□□□□□ -0.51
DEPDC1-201ENST00000370966 PTPRJQ12913 1337 aa11.83□□□□□ -0.51
DEPDC1-201ENST00000370966 MT-CYBP00156 380 aaPredicted RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 NMBRP28336 390 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 GSSP48637 474 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TAS2R39P59534 338 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ROR2Q01974 943 aaKnown RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TRAF3Q13114 568 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 SH3PXD2AQ5TCZ1 1133 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ANXA8L1Q5VT79 327 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ZNF544Q6NX49 715 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 SERPINA13PQ6UXR4 307 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 GK5Q6ZS86 529 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 DET1Q7L5Y6 550 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TMEM192Q8IY95 271 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 DEPDC4Q8N2C3 294 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 DGCR6LQ9BY27 220 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 KLHL25Q9H0H3 589 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 CLIC5Q9NZA1 410 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ANGPT4Q9Y264 503 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TSC22D4Q9Y3Q8 395 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 GMPPBQ9Y5P6 360 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 MOXD2PA6NHM9 499 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 SLC22A2O15244 555 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 KCNA10Q16322 511 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TAPT1Q6NXT6 567 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TRIM40Q6P9F5 258 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 OR8H2Q8N162 312 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 BRSK1Q8TDC3 778 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 WDR60Q8WVS4 1066 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TWNKQ96RR1 684 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 BRD9Q9H8M2 597 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ETAA1Q9NY74 926 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 HMGXB4Q9UGU5 601 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 CHD2O14647 1828 aaKnown RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TOPAZ1Q8N9V7 1692 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TK2O00142 265 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 MYL12BO14950 172 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 LAG3P18627 525 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 OGNP20774 298 aaKnown RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 MAGEA10P43363 369 aaPredicted RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 AP1S1P61966 158 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 AP5B1Q2VPB7 878 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 ZIK1Q3SY52 487 aaPredicted RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 RAET1GQ6H3X3 334 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 TWIST2Q8WVJ9 160 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 CENPIQ92674 756 aaPredicted RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 RNFT2Q96EX2 444 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 GPR21Q99679 349 aa11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 CADM1Q9BY67 442 aaKnown RBP11.83□□□□□ -0.52
DEPDC1-201ENST00000370966 IRAK2O43187 625 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 STK16O75716 305 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 NOVP48745 357 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CXCR3P49682 368 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CACNG1Q06432 222 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 FUT10Q6P4F1 479 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 BNIPLQ7Z465 357 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 OFCC1Q8IZS5 231 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 AMER2Q8N7J2 671 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 KCTD13Q8WZ19 329 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 DAPK2Q9UIK4 370 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 GLYATL1P3A0A0U1RQE8 302 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 UNCXA6NJT0 531 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 A8MUI8 341 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 DNAJA2O60884 412 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 SLC25A14O95258 325 aaPredicted RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 VARS2Q5ST30 1063 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 MFSD4BQ5TF39 518 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 TXNRD3NBQ6F5E7 133 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CLEC20AQ6ZU45 233 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ZNF781Q8N8C0 355 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 C19orf18Q8NEA5 215 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 BPIFB6Q8NFQ5 453 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 OR7A2PQ8NGA2 310 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 OR2T34Q8NGX1 318 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 OR2T3Q8NH03 318 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 LMO3Q8TAP4 145 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 C2orf15Q8WU43 125 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 C10orf82Q8WW14 230 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 USP7Q93009 1102 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 DGCR14Q96DF8 476 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ZNF317Q96PQ6 595 aaPredicted RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CCNB1IP1Q9NPC3 277 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 NUDT4Q9NZJ9 180 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 FNIP2Q9P278 1114 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 COPG1Q9Y678 874 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 FKTNO75072 461 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CENPAP49450 140 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ATXN1P54253 815 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 ADARP55265 1226 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 CLCQ05315 142 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 LSM12Q3MHD2 195 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 FAM46CQ5VWP2 391 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 TRAF7Q6Q0C0 670 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 UBE2R2Q712K3 238 aaPredicted RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 EIF3MQ7L2H7 374 aaKnown RBP11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
DEPDC1-201ENST00000370966 SLC35F5Q8WV83 523 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms