RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 KLHDC8BQ8IXV7 354 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 PELI3Q8N2H9 469 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 CBARPQ8N350 705 aaPredicted RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 WDR92Q96MX6 357 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 RIOK2Q9BVS4 552 aaKnown RBP14.79□□□□□ -0.04
COL9A1-204ENST00000370496 RAD18Q9NS91 495 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 PKP3Q9Y446 797 aa14.79□□□□□ -0.04
COL9A1-204ENST00000370496 RGSL1A5PLK6 1076 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 SDC3O75056 442 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 ECEL1O95672 775 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 KRT14P02533 472 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 KELP23276 732 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 DCDC1P59894 354 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 CDK3Q00526 305 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 SLC14A1Q13336 389 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 SEPT6Q14141 434 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 NYAP1Q6ZVC0 841 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 TMC3Q7Z5M5 1100 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 DNAAF3Q8N9W5 541 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 FUBP1Q96AE4 644 aaKnown RBP14.78□□□□□ -0.04
COL9A1-204ENST00000370496 SPATA16Q9BXB7 569 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
COL9A1-204ENST00000370496 CDH19Q9H159 772 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 FAM83DQ9H4H8 585 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 BPIFA1Q9NP55 256 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 PIH1D1Q9NWS0 290 aaKnown RBP14.78□□□□□ -0.04
COL9A1-204ENST00000370496 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL9A1-204ENST00000370496 KLQ9UEF7 1012 aa14.78□□□□□ -0.04
COL9A1-204ENST00000370496 C2orf81A6NN90 581 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 PDE2AO00408 941 aaPredicted RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 CRTAMO95727 393 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 NME1P15531 152 aaKnown RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 TEAD1P28347 426 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 HMGCLP35914 325 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 TERF1P54274 439 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 CDH17Q12864 832 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 GPS1Q13098 491 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 SUZ12Q15022 739 aaKnown RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 PPP1R7Q15435 360 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 TAF1AQ15573 450 aaPredicted RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 KCTD19Q17RG1 926 aaPredicted RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ZNF542PQ5EBM4 170 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 HENMT1Q5T8I9 393 aaKnown RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ENPP7Q6UWV6 458 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ADAMTSL4Q6UY14 1074 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 NAXDQ8IW45 347 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 TTC30BQ8N4P2 665 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 EID2BQ96D98 161 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 RTKNQ9BST9 563 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ZSCAN5AQ9BUG6 496 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ARNT2Q9HBZ2 717 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 EIF2B3Q9NR50 452 aaKnown RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 NFKBIL1Q9UBC1 381 aaPredicted RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 RNF14Q9UBS8 474 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 APOBEC3BQ9UH17 382 aaKnown RBP14.77□□□□□ -0.04
COL9A1-204ENST00000370496 ARL5AQ9Y689 179 aa14.77□□□□□ -0.04
COL9A1-204ENST00000370496 CEP250Q9BV73 2442 aa14.77□□□□□ -0.05
COL9A1-204ENST00000370496 DNAH14Q0VDD8 3507 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 INPP4BO15327 924 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 STX7O15400 261 aaKnown RBP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 FLRT2O43155 660 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 BUD23O43709 281 aaKnown RBP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PCDHGA12O60330 932 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 SUN1O94901 812 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 BPIP17213 487 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 JUNDP17535 347 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 KCNA4P22459 653 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 TRIM23P36406 574 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 SPAM1P38567 509 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 HNRNPKP61978 463 aaKnown RBP eCLIP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PDE1BQ01064 536 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PPARDQ03181 441 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 POU6F1Q14863 301 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 ZDHHC20Q5W0Z9 365 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 DENND5AQ6IQ26 1287 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 DOK6Q6PKX4 331 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 GATAD2AQ86YP4 633 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 HID1Q8IV36 788 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 KLHL7Q8IXQ5 586 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PHACTR4Q8IZ21 702 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 GPR26Q8NDV2 337 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 OR56A4Q8NGH8 313 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 OR52K1Q8NGK4 314 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 SETD7Q8WTS6 366 aaKnown RBP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PDXPQ96GD0 296 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PLEKHG4BQ96PX9 1271 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 AGAP2Q99490 1192 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 TEX101Q9BY14 249 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 SLC13A1Q9BZW2 595 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 MOSPD1Q9UJG1 213 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 PCDHGB2Q9Y5G2 931 aa14.76□□□□□ -0.05
COL9A1-204ENST00000370496 ASCC3Q8N3C0 2202 aaKnown RBP14.76□□□□□ -0.05
COL9A1-204ENST00000370496 TMEM202A6NGA9 273 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 FADS2P1A8MWK0 482 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 CCDC188H7C350 402 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 PPFIA2O75334 1257 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 RASGRP1O95267 797 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms