RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 KCNQ1P51787 676 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 HSPA14Q0VDF9 509 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KLF10Q13118 480 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 UBAP2LQ14157 1087 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TRIM60Q495X7 471 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 RNF220Q5VTB9 566 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM46CQ5VWP2 391 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 LINGO4Q6UY18 593 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CTU1Q7Z7A3 348 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TMEM135Q86UB9 458 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 CLEC4FQ8N1N0 589 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPATA6LQ8N4H0 392 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 POP5Q969H6 163 aaKnown RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 VPS33AQ96AX1 596 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF570Q96NI8 536 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 IL12RB2Q99665 862 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 KCTD14Q9BQ13 255 aaPredicted RBP5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 TCF25Q9BQ70 676 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MAN1C1Q9NR34 630 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 MTRRQ9UBK8 725 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 SPASTQ9UBP0 616 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 INSL5Q9Y5Q6 135 aa5.31□□□□□ -1.56
SMNDC1-202ENST00000369603 A8MX80 341 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TK2O00142 265 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC28A1O00337 649 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CCL16O15467 120 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ULK1O75385 1050 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PCDH8O95206 1070 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 LATS1O95835 1130 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 HGFP14210 728 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PBLDP30039 288 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 GRK3P35626 688 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CCNFP41002 786 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 RAP1GDS1P52306 607 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 RPL26P61254 145 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC25A3Q00325 362 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SGCGQ13326 291 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 FUT11Q495W5 492 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SPDYE7PQ495Y7 208 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR33Q49SQ1 333 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PAGE2BQ5JRK9 111 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SIRPB2Q5JXA9 342 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TCHHL1Q5QJ38 904 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SERPINA13PQ6UXR4 307 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TRMT11Q7Z4G4 463 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SPATA19Q7Z5L4 167 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SYTL1Q8IYJ3 562 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CMTR2Q8IYT2 770 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ULK2Q8IYT8 1036 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 GALNT4Q8N4A0 578 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CNTD1Q8N815 330 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 RNF217Q8TC41 542 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF483Q8TF39 744 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 OR8D1Q8WZ84 308 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ELMO1Q92556 727 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 AZIN2Q96A70 460 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 GPR21Q99679 349 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM192AQ9GZU8 254 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TFB2MQ9H5Q4 396 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 NMUR1Q9HB89 426 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 WDR6Q9NNW5 1121 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SPAG4Q9NPE6 437 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ARHGEF3Q9NR81 526 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 OXSMQ9NWU1 459 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CHCHD3Q9NX63 227 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PLK2Q9NYY3 685 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 NUDT4Q9NZJ9 180 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 LEF1Q9UJU2 399 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM32AQ9Y421 112 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SNX13Q9Y5W8 968 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PDE5AO76074 875 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 FKBP9O95302 570 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PRAMEF1O95521 474 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 IL4RP24394 825 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ANXA11P50995 505 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CCR3P51677 355 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PSME3P61289 254 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PFKPQ01813 784 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 NRG1Q02297 640 aaPredicted RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 LCP2Q13094 533 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PRKG2Q13237 762 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 DSC3Q14574 896 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 ADRM1Q16186 407 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 RAB6CQ53S08 254 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CLLU1OSQ5K130 101 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CWF19L1Q69YN2 538 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 RIPOR1Q6ZS17 1223 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 FKBP9P1Q75LS8 142 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 LRRTM3Q86VH5 581 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 PGBD3Q8N328 593 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 AADATQ8N5Z0 425 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 DCAF4L2Q8NA75 395 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TRPV1Q8NER1 839 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 OSCP1Q8WVF1 389 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 SMG7Q92540 1137 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 UBE2E3Q969T4 207 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 IMP4Q96G21 291 aaKnown RBP5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 CDKN2AIPNLQ96HQ2 116 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 NSMCE2Q96MF7 247 aa5.3□□□□□ -1.56
SMNDC1-202ENST00000369603 TRAPPC9Q96Q05 1148 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms