RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PCLAFQ15004 111 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 ITPRIPL2Q3MIP1 535 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 POM121L1PQ3SYA9 428 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 CCDC153Q494R4 210 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 GKAP1Q5VSY0 366 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-202ENST00000369409 MTSS1LQ765P7 747 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 NUDCD3Q8IVD9 361 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 NECTIN4Q96NY8 510 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 OSBPL1AQ9BXW6 950 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 PITPNM3Q9BZ71 974 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 B4GALT6Q9UBX8 382 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 VWA7Q9Y334 891 aa16.76■□□□□ 0.27
PHGDH-202ENST00000369409 USP15Q9Y4E8 981 aaPredicted RBP16.76■□□□□ 0.27
PHGDH-202ENST00000369409 SPTBN5Q9NRC6 3674 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 TMEM265A0A087WTH1 108 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 A0A087X1B8 175 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 ARNTLO00327 626 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 GAPDHSO14556 408 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 EDF1O60869 148 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 BPIP17213 487 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 GLRBP48167 497 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 TTPAP49638 278 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 POLR2LP62875 67 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 CACNG1Q06432 222 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 CHI3L2Q15782 390 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 AARS2Q5JTZ9 985 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 CGB2Q6NT52 195 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 TAS2R42Q7RTR8 314 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 PIM3Q86V86 326 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 SCG3Q8WXD2 468 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 TCF12Q99081 682 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 AARSD1Q9BTE6 412 aaKnown RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 ZDHHC4Q9NPG8 344 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 SIRPGQ9P1W8 387 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 MTF2Q9Y483 593 aaPredicted RBP16.75■□□□□ 0.27
PHGDH-202ENST00000369409 PLXNA2O75051 1894 aa16.75■□□□□ 0.27
PHGDH-202ENST00000369409 UNC80Q8N2C7 3258 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 COL4A2P08572 1712 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 EDDM13A0A1B0GTR0 161 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 TSPAN11A1L157 253 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 ANTXRLA6NF34 631 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 H3BQ06 376 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 BIRC5O15392 142 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 SRP72O76094 671 aaKnown RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 KAT7O95251 611 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 CHRM1P11229 460 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 COL6A2P12110 1019 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 KCNA4P22459 653 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 FDXRP22570 491 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 EIF2DP41214 584 aaKnown RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 SOX9P48436 509 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 ILF2Q12905 390 aaKnown RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 DLG1Q12959 904 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 HTR4Q13639 388 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 RNF187Q5TA31 235 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 SERPINA13PQ6UXR4 307 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 STK40Q8N2I9 435 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 SPATA6LQ8N4H0 392 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 KDM1BQ8NB78 822 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 PBXIP1Q96AQ6 731 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 SEC16BQ96JE7 1060 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 FAM161BQ96MY7 647 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 UNKQ9C0B0 810 aaKnown RBP16.74■□□□□ 0.27
PHGDH-202ENST00000369409 NMRAL1Q9HBL8 299 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 GPAMQ9HCL2 828 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 EPS15L1Q9UBC2 864 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 COPG2Q9UBF2 871 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 CD207Q9UJ71 328 aa16.74■□□□□ 0.27
PHGDH-202ENST00000369409 GLYATL1P3A0A0U1RQE8 302 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 UPK3BL1B0FP48 263 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 UPK3BL2E5RIL1 263 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 TK2O00142 265 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 C1SP09871 688 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
PHGDH-202ENST00000369409 ALDH3A1P30838 453 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 FMO4P31512 558 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 SPAM1P38567 509 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 ZNF805Q5CZA5 627 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 LRRC8EQ6NSJ5 796 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 ZCCHC23Q6ZST2 131 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 PIGWQ7Z7B1 504 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 LCA5Q86VQ0 697 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 TRIM42Q8IWZ5 723 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 CACNA2D3Q8IZS8 1091 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 SUSD6Q92537 303 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■■■■ 60.5
PHGDH-202ENST00000369409 FAM136AQ96C01 138 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 NXNL1Q96CM4 212 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 LRIG1Q96JA1 1093 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 SCYL1Q96KG9 808 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 C19orf43Q9BQ61 176 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 TSSK1BQ9BXA7 367 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 CCDC68Q9H2F9 335 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 IL26Q9NPH9 171 aa16.73■□□□□ 0.27
PHGDH-202ENST00000369409 APPL1Q9UKG1 709 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms