RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 XKR3Q5GH77 459 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 ZBTB33Q86T24 672 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 CDR2LQ86X02 465 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-201ENST00000368686 PSTKQ8IV42 348 aaKnown RBP17.9■□□□□ 0.46
CHTOP-201ENST00000368686 MCFD2Q8NI22 146 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 TMEM125Q96AQ2 219 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 SEPHS2Q99611 448 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 CCDC90BQ9GZT6 254 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 C2orf40Q9H1Z8 148 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 TNFRSF12AQ9NP84 129 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 DDX28Q9NUL7 540 aaKnown RBP17.9■□□□□ 0.46
CHTOP-201ENST00000368686 STAP1Q9ULZ2 295 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 CAB39Q9Y376 341 aaPredicted RBP17.9■□□□□ 0.46
CHTOP-201ENST00000368686 MFHAS1Q9Y4C4 1052 aa17.9■□□□□ 0.46
CHTOP-201ENST00000368686 PRSS23O95084 383 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 HOXC6P09630 235 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 ALDOCP09972 364 aaKnown RBP17.89■□□□□ 0.46
CHTOP-201ENST00000368686 STMN1P16949 149 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 M6PRP20645 277 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 ARL2P36404 184 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 PGGT1BP53609 377 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 EMX1Q04741 257 aaPredicted RBP17.89■□□□□ 0.46
CHTOP-201ENST00000368686 POU5F1BQ06416 359 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 OLIG2Q13516 323 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 UGP2Q16851 508 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 CTU2Q2VPK5 515 aaKnown RBP17.89■□□□□ 0.46
CHTOP-201ENST00000368686 PYCR3Q53H96 274 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 BEND5Q7L4P6 421 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.89■□□□□ 0.46
CHTOP-201ENST00000368686 NAT16Q8N8M0 369 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 HEXIM2Q96MH2 286 aaKnown RBP17.89■□□□□ 0.46
CHTOP-201ENST00000368686 RNF145Q96MT1 663 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 SLA2Q9H6Q3 261 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 NTN4Q9HB63 628 aa17.89■□□□□ 0.46
CHTOP-201ENST00000368686 ZBBXA8MT70 800 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 OGTO15294 1046 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 MFSD11O43934 449 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 PGK1P00558 417 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 NCK1P16333 377 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 ACVR2AP27037 513 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 GALK2Q01415 458 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 CD47Q08722 323 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 NFE2Q16621 373 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-201ENST00000368686 ZFP69Q49AA0 526 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 KIAA1841Q6NSI8 718 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 CCBE1Q6UXH8 406 aaPredicted RBP17.89■□□□□ 0.45
CHTOP-201ENST00000368686 STK32CQ86UX6 486 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 IFNEQ86WN2 208 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 SLC38A6Q8IZM9 456 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 IL17RDQ8NFM7 739 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 TMBIM1Q969X1 311 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 SDCCAG3Q96C92 435 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 RMDN1Q96DB5 314 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 PDCD2LQ9BRP1 358 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 IRF2BPLQ9H1B7 796 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 FBRSL1Q9HCM7 1045 aaKnown RBP17.89■□□□□ 0.45
CHTOP-201ENST00000368686 IL37Q9NZH6 218 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 OSGIN1Q9UJX0 560 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 DOCK5Q9H7D0 1870 aa17.89■□□□□ 0.45
CHTOP-201ENST00000368686 CENPXA8MT69 81 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PDZK1P1A8MUH7 402 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 UPK1AO00322 258 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 MTSS1O43312 755 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 USP12O75317 370 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 FKBP9O95302 570 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 CCDC159P0C7I6 412 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 ARL4AP40617 200 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PTGER2P43116 358 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 TUFMP49411 452 aaKnown RBP17.88■□□□□ 0.45
CHTOP-201ENST00000368686 EN1Q05925 392 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-201ENST00000368686 NEK5Q6P3R8 708 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PROSER1Q86XN7 944 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PLD3Q8IV08 490 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 RIMKLAQ8IXN7 391 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 MIER2Q8N344 545 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 KIAA1958Q8N8K9 716 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 ZNF280CQ8ND82 737 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 DNERQ8NFT8 737 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 BIRC7Q96CA5 298 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 CEP295NLQ96MC4 621 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 MMP27Q9H306 513 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 STMN3Q9NZ72 180 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.88■□□□□ 0.45
CHTOP-201ENST00000368686 CPSF3Q9UKF6 684 aaKnown RBP17.88■□□□□ 0.45
CHTOP-201ENST00000368686 FBXO5Q9UKT4 447 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 FZD1Q9UP38 647 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 USP3Q9Y6I4 520 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 A0A087X1B8 175 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PTGES3LE9PB15 166 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 AGXTP21549 392 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 NPY2RP49146 381 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 RACK1P63244 317 aaKnown RBP17.88■□□□□ 0.45
CHTOP-201ENST00000368686 SLC6A3Q01959 620 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 LIPEQ05469 1076 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 FAM83EQ2M2I3 478 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 UGT3A2Q3SY77 523 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 DPH6Q7L8W6 267 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 PID1Q7Z2X4 250 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 NT5DC4Q86YG4 428 aa17.88■□□□□ 0.45
CHTOP-201ENST00000368686 GRAMD2AQ8IUY3 354 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms