RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 CLPXO76031 633 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 FAM76BQ5HYJ3 339 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
TPR-201ENST00000367478 SLC27A1Q6PCB7 646 aa12.42□□□□□ -0.42
TPR-201ENST00000367478 GRIN3BO60391 1043 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CCNCP24863 283 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CHRNA5P30532 468 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 IST1P53990 364 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ATXN1P54253 815 aaKnown RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 ABCA11PQ4W5N1 156 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 LACRTQ9GZZ8 138 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.41□□□□□ -0.425e-7■■□□□ 11.7
TPR-201ENST00000367478 IKZF2Q9UKS7 526 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 KCNK1O00180 336 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SLC37A4O43826 429 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 NRP2O60462 931 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 LPOP22079 712 aaPredicted RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 USP43Q70EL4 1123 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SCUBE3Q8IX30 993 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 GMCL1P1Q8NEA9 526 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 AGBL3Q8NEM8 1001 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 OR2T12Q8NG77 320 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 WNT8BQ93098 351 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 MYOZ2Q9NPC6 264 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ZNF510Q9Y2H8 683 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 AMPD1P23109 780 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SLC25A3Q00325 362 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 VMACQ2NL98 169 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SDR16C5Q8N3Y7 309 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 OR4C6Q8NH72 309 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CDH19Q9H159 772 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SMPD3Q9NY59 655 aaPredicted RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 LRRC7Q96NW7 1537 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CABYRO75952 493 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 FADS2O95864 444 aaKnown RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 PRR5P85299 388 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SULT2A1Q06520 285 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ORC1Q13415 861 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 NIPA1Q7RTP0 329 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 NXPE2Q96DL1 559 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 AIF1LQ9BQI0 150 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ZNF670Q9BS34 389 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 RHBGQ9H310 441 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ANKRA2Q9H9E1 313 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CALML5Q9NZT1 146 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 SLC35G4P0C7Q5 338 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 BAP1Q92560 729 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 PCDHGB2Q9Y5G2 931 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ANXA2P2A6NMY6 339 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 FGF1P05230 155 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ANXA2P07355 339 aaKnown RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 RANBP3LQ86VV4 465 aaPredicted RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 PRMT6Q96LA8 375 aaPredicted RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 SEMA6BQ9H3T3 888 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CHMP1AQ9HD42 196 aaPredicted RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 MAT2BQ9NZL9 334 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 L7N2F9 121 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CSF1RP07333 972 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 KELP23276 732 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 AIF1P55008 147 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 VAMP2P63027 116 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 CMTR2Q8IYT2 770 aaKnown RBP12.41□□□□□ -0.42
TPR-201ENST00000367478 OR52K2Q8NGK3 314 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 MAGEE1Q9HCI5 957 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 FAM237BA0A1B0GVD1 139 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 VTNP04004 478 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 LAMP2P13473 410 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 TEAD4Q15561 434 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ALG10Q5BKT4 473 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 DOK6Q6PKX4 331 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 MCEMP1Q8IX19 187 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ZSWIM2Q8NEG5 633 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 DNAJC18Q9H819 358 aa12.41□□□□□ -0.42
TPR-201ENST00000367478 ERP29P30040 261 aaKnown RBP12.4□□□□□ -0.42
TPR-201ENST00000367478 OR12D3Q9UGF7 316 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 PEX11AO75192 247 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 P2RY8Q86VZ1 359 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 PNLDC1Q8NA58 520 aaKnown RBP12.4□□□□□ -0.42
TPR-201ENST00000367478 TPK1Q9H3S4 243 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 BRD9Q9H8M2 597 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 C14orf105Q9NVL8 296 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 SPTLC1O15269 473 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 SCN2BO60939 215 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 CD86P42081 329 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 RORCP51449 518 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 ILF3Q12906 894 aaKnown RBP eCLIP12.4□□□□□ -0.42
TPR-201ENST00000367478 PLEKHH3Q7Z736 793 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 ZDHHC6Q9H6R6 413 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 DNAAF2Q9NVR5 837 aaKnown RBP12.4□□□□□ -0.42
TPR-201ENST00000367478 CASTOR2A6NHX0 329 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 SRSF11Q05519 484 aaKnown RBP12.4□□□□□ -0.42
TPR-201ENST00000367478 SCARF1Q14162 830 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 UNC5AQ6ZN44 842 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 ALLCQ8N6M5 410 aa12.4□□□□□ -0.42
TPR-201ENST00000367478 ARL10Q8N8L6 244 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms