RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 PHF13Q86YI8 300 aaPredicted RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 OR5T3Q8NGG3 340 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 TSEN15Q8WW01 171 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 HDAC10Q969S8 669 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 COX4I2Q96KJ9 171 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 MCCC2Q9HCC0 563 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 HBS1LQ9Y450 684 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 NR2F6P10588 404 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 SPAM1P38567 509 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 WASP42768 502 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PPP3CAQ08209 521 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 CYP4F3Q08477 520 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PUDPQ08623 228 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 OR52K2Q8NGK3 314 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 FATE1Q969F0 183 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 IKZF2Q9UKS7 526 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 DCLK1O15075 740 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PSMG1O95456 288 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 CORO1AP31146 461 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 SEC13P55735 322 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 RFX4Q33E94 735 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 C9orf57Q5W0N0 161 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 ANKRD23Q86SG2 305 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 FBXW8Q8N3Y1 598 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 WDR18Q9BV38 432 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 CBX6O95503 412 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PRKAR1AP10644 381 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 ERCC2P18074 760 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 IL12BP29460 328 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 AVPR1BP47901 424 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 GRSF1Q12849 480 aaKnown RBP eCLIP15.68■□□□□ 0.12e-7■□□□□ 8.2
NUCKS1-201ENST00000367142 BMT2Q1RMZ1 405 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 HKDC1Q2TB90 917 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 PUS10Q3MIT2 529 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 ZIK1Q3SY52 487 aaPredicted RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 VSTM1Q6UX27 236 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 CCDC54Q8NEL0 328 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 ATP6V1C2Q8NEY4 427 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 MKL1Q969V6 931 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 IL12RB2Q99665 862 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 TNKS2Q9H2K2 1166 aa15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 DDX18Q9NVP1 670 aaKnown RBP15.68■□□□□ 0.1
NUCKS1-201ENST00000367142 NWD1Q149M9 1564 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 RPP40O75818 363 aaKnown RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 GNSP15586 552 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ITPKAP23677 461 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 RPL22P35268 128 aaKnown RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 CASP9P55211 416 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 CERCAMQ5T4B2 595 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 TMPRSS11AQ6ZMR5 421 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ZNF730Q6ZMV8 503 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 SLAIN1Q8ND83 568 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 HERVK_113Q902F9 699 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 IL25Q9H293 177 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 CCNB1IP1Q9NPC3 277 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ATXN1P54253 815 aaKnown RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 LRRC17Q8N6Y2 441 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 SLC43A3Q8NBI5 491 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 PYDC1Q8WXC3 89 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 PIK3R6Q5UE93 754 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ZFPM1Q8IX07 1006 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ZBTB10Q96DT7 871 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 FAM198AQ9UFP1 575 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 PRKAB1Q9Y478 270 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 DNASE1L1P49184 302 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 SLC7A2P52569 658 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 DGKZQ13574 1117 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 CADM2Q8N3J6 435 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 MRIQ9BWK5 157 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 CHMP1AQ9HD42 196 aaPredicted RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ING4Q9UNL4 249 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 RSL1D1O76021 490 aaKnown RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 ITGA2BP08514 1039 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 TSPAN8P19075 237 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 WNT3AP56704 352 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 USP4Q13107 963 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 NAIF1Q69YI7 327 aaPredicted RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 BLOC1S4Q9NUP1 217 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 L1RE1Q9UN81 338 aa15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 SAMD4AQ9UPU9 718 aaKnown RBP15.67■□□□□ 0.1
NUCKS1-201ENST00000367142 SLC22A3O75751 556 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 PTPN5P54829 565 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 TAS2R50P59544 299 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 MINDY4Q4G0A6 757 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 MSANTD2Q6P1R3 559 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 SLC38A3Q99624 504 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 MRPL45Q9BRJ2 306 aaKnown RBP15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 CEP152O94986 1710 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 SIN3BO75182 1162 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 CYB5AP00167 134 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 SAGP10523 405 aaPredicted RBP15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 CACNG1Q06432 222 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 TRAP1Q12931 704 aaKnown RBP15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 TAF10Q12962 218 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 INAVAQ3KP66 663 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 CFAP52Q8N1V2 620 aa15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 VANGL1Q8TAA9 524 aaPredicted RBP15.66■□□□□ 0.1
NUCKS1-201ENST00000367142 HIST1H2AAQ96QV6 131 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms