RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 A6NNZ2 444 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 AVILO75366 819 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ANXA9O76027 345 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CPP00450 1065 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 NR1D1P20393 614 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 PRKCHP24723 683 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CD27P26842 260 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SSTR1P30872 391 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 STX2P32856 288 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ACSL1P33121 698 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SKOR1P84550 965 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 LONRF1Q17RB8 773 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 HP1BP3Q5SSJ5 553 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 TMEM215Q68D42 235 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 KCTD16Q68DU8 428 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 RFWD3Q6PCD5 774 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 KDM7AQ6ZMT4 941 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CYS1Q717R9 158 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SETD3Q86TU7 594 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 IGDCC3Q8IVU1 814 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CACTIN-AS1Q8N1I8 211 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SH2D3CQ8N5H7 860 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ARFGAP2Q8N6H7 521 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 NSMCE1Q8WV22 266 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ARHGEF2Q92974 986 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 BIRC7Q96CA5 298 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 PRICKLE1Q96MT3 831 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF599Q96NL3 588 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 NAT9Q9BTE0 207 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 MLPHQ9BV36 600 aaPredicted RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ACSS3Q9H6R3 686 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 LRRC40Q9H9A6 602 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 SP110Q9HB58 689 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CASS4Q9NQ75 786 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 RBM22Q9NW64 420 aaKnown RBP eCLIP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 PSD3Q9NYI0 1048 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 ZC3H7BQ9UGR2 993 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 LSM7Q9UK45 103 aaKnown RBP11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 CLCA2Q9UQC9 943 aa11.3□□□□□ -0.6
CSNK1E-202ENST00000366216 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 RP1P56715 2156 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 PRAMEF11O60813 436 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SEMA4FO95754 770 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 GCAP28676 217 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ETFBP38117 255 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 GRIA1P42261 906 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 GEMP55040 296 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 C21orf59P57076 290 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 GEMIN4P57678 1058 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 MAGOHP61326 146 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 RPS24P62847 133 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 VAC14Q08AM6 782 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF177Q13360 481 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ILKQ13418 452 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 MARC1Q5VT66 337 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 STEAP4Q687X5 459 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 NAPEPLDQ6IQ20 393 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF783Q6ZMS7 281 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 LINC00523Q86TU6 105 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 CIR1Q86X95 450 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 CFAP52Q8N1V2 620 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 CPXM2Q8N436 756 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 EID2Q8N6I1 236 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 DCBLD1Q8N8Z6 715 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 FBF1Q8TES7 1133 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SNRNP27Q8WVK2 155 aaKnown RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 HIC2Q96JB3 615 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 CYTH2Q99418 400 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 DHRS4Q9BTZ2 278 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 ACE2Q9BYF1 805 aaPredicted RBP11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 TRIM4Q9C037 500 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SLC25A51Q9H1U9 297 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 TBC1D30Q9Y2I9 924 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SLC27A6Q9Y2P4 619 aa11.29□□□□□ -0.6
CSNK1E-202ENST00000366216 SPTBN1Q01082 2364 aaKnown RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 TCRBV9S1A1TA0A576 114 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 SMIM23A6NLE4 172 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 F5H423 210 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 J3KR12 359 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 VILLO15195 856 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 KDELR3O43731 214 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 TSPAN3O60637 253 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 NEBLO76041 1014 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 FSBPO95073 299 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 HLA-DQB2P05538 268 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ACVRL1P37023 503 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 NPY2RP49146 381 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 GYS2P54840 703 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 GNA12Q03113 381 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 MPP3Q13368 585 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ZNF234Q14588 700 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 RFTN1Q14699 578 aaPredicted RBP11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 E2F5Q15329 346 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
CSNK1E-202ENST00000366216 ARMC3Q5W041 872 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms