RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 C1orf87Q8N0U7 546 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 PSPC1Q8WXF1 523 aaKnown RBP4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 SAAL1Q96ER3 474 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 FEM1CQ96JP0 617 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 PIP5K1AQ99755 562 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 SLC28A3Q9HAS3 691 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 BRF2Q9HAW0 419 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 PREBQ9HCU5 417 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 TMEM30AQ9NV96 361 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 MCM9Q9NXL9 1143 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 CNOT8Q9UFF9 292 aaKnown RBP4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 HAO1Q9UJM8 370 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 LOXL2Q9Y4K0 774 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 KDM3AQ9Y4C1 1321 aa4.45□□□□□ -1.7
RNU4-28P-201ENST00000364739 AKR1B15C9JRZ8 316 aaPredicted RBP4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 C16orf97H3BN30 126 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 NKX2-2O95096 273 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 MT3P25713 68 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 CASP6P55212 293 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 SIGIRRQ6IA17 410 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 FAM122CQ6P4D5 195 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 TSSK4Q6SA08 328 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 RAD9BQ6WBX8 426 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 TMPRSS12Q86WS5 348 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 BEST3Q8N1M1 668 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 PCDH20Q8N6Y1 951 aaKnown RBP4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 OR14L1PQ8NHC6 308 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 NR4A3Q92570 626 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 IFIH1Q9BYX4 1025 aaKnown RBP4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 UBN1Q9NPG3 1134 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 ZFP57Q9NU63 452 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 ACSS1Q9NUB1 689 aaPredicted RBP4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 POU2F3Q9UKI9 436 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 OR2W1Q9Y3N9 320 aa4.44□□□□□ -1.7
RNU4-28P-201ENST00000364739 C1orf226A1L170 272 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 NPHP1O15259 732 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 SOCS5O75159 536 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 GAS8-AS1O95177 125 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 ATP1A1P05023 1023 aaKnown RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 SP1P08047 785 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 MCM3P25205 808 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 GNL1P36915 607 aaPredicted RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 RGS2P41220 211 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 TROAPQ12815 778 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 TMEM115Q12893 351 aaPredicted RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 DCTN2Q13561 401 aaKnown RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 FRG1Q14331 258 aaKnown RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 SYT16Q17RD7 645 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 CXorf66Q5JRM2 361 aaPredicted RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 CDC73Q6P1J9 531 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 RNF113BQ8IZP6 322 aaKnown RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 LMNTD1Q8N9Z9 388 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 ACVR1CQ8NER5 493 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 OR5R1Q8NH85 324 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 METTL6Q8TCB7 284 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 LRRC8CQ8TDW0 803 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 PPM1EQ8WY54 764 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 IGSF8Q969P0 613 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 CDCA5Q96FF9 252 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 SH3GL2Q99962 352 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 TMEM47Q9BQJ4 181 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 PRKRIP1Q9H875 184 aaPredicted RBP4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 ASAH2Q9NR71 780 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 PADI3Q9ULW8 664 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 ADAM18Q9Y3Q7 739 aa4.43□□□□□ -1.7
RNU4-28P-201ENST00000364739 ASPDHA6ND91 283 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 PRR23AA6NEV1 266 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 NPIPB15A6NHN6 443 aaPredicted RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 TTC36A6NLP5 189 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 EIF3CLB5ME19 914 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 CETPP11597 493 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 KRT10P13645 584 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 DDX5P17844 614 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 TCEA1P23193 301 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 RRM1P23921 792 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 MARK3P27448 753 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 IL15P40933 162 aaPredicted RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 RAD23BP54727 409 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 EIF3BP55884 814 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 CSNK2A1P68400 391 aaPredicted RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 CEBPZQ03701 1054 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 FOXD4Q12950 439 aaPredicted RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 G3BP1Q13283 466 aaKnown RBP eCLIP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 KRT24Q2M2I5 525 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 USP41Q3LFD5 358 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 C6orf141Q5SZD1 244 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 INO80CQ6PI98 192 aaPredicted RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 ATF7IPQ6VMQ6 1270 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 SRBD1Q8N5C6 995 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 TSPYL6Q8N831 410 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 KCNH5Q8NCM2 988 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 CSNK2A3Q8NEV1 391 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 APBB2Q92870 758 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 PERPQ96FX8 193 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 ACOX2Q99424 681 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 TRMT61BQ9BVS5 477 aaKnown RBP4.42□□□□□ -1.7
RNU4-28P-201ENST00000364739 SCPEP1Q9HB40 452 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms