RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RRN3P2A6NIE6 340 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SNAP29O95721 258 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 THP07101 528 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SLC5A3P53794 718 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 FGD3Q5JSP0 725 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 PAGE3Q5JUK9 113 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SAMD4BQ5PRF9 694 aaKnown RBP10.57□□□□□ -0.72
SMC3-201ENST00000361804 KIAA0930Q6ICG6 404 aaPredicted RBP10.57□□□□□ -0.72
SMC3-201ENST00000361804 KDELC1Q6UW63 502 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 AGMOQ6ZNB7 445 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SCD5Q86SK9 330 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 PGBD5Q8N414 524 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 MAGEE2Q8TD90 523 aaPredicted RBP10.57□□□□□ -0.72
SMC3-201ENST00000361804 PGAP3Q96FM1 320 aaPredicted RBP10.57□□□□□ -0.72
SMC3-201ENST00000361804 CDK15Q96Q40 435 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SLC25A23Q9BV35 468 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 PNPLA3Q9NST1 481 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 RRN3Q9NYV6 651 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 ANAPC1Q9H1A4 1944 aa10.57□□□□□ -0.72
SMC3-201ENST00000361804 SLC22A2O15244 555 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 S1PR4O95977 384 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 HSPA13P48723 471 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PSEN2P49810 448 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 CDKN1CP49918 316 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 GEMP55040 296 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 DNAJB13P59910 316 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 KCTD21Q4G0X4 260 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 IQSEC1Q6DN90 963 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 UGT3A1Q6NUS8 523 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 RALGPS2Q86X27 583 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 DDI1Q8WTU0 396 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PBXIP1Q96AQ6 731 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ADI1Q9BV57 179 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PLK2Q9NYY3 685 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 RAD54BQ9Y620 910 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 MUSKO15146 869 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PEX11BO96011 259 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 MMP2P08253 660 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 VARSP26640 1264 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 ADSLP30566 484 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 GRIK1P39086 918 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 SERPINH1P50454 418 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 CDK9P50750 372 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 DDR2Q16832 855 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 CYP51A1Q16850 503 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 SIRPB2Q5JXA9 342 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ERMP1Q7Z2K6 904 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PLEKHH3Q7Z736 793 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 MIB1Q86YT6 1006 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 EXOC2Q96KP1 924 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 TSGA13Q96PP4 275 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 CLK4Q9HAZ1 481 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 FAM105AQ9NUU6 356 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 INTS7Q9NVH2 962 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 FAF1Q9UNN5 650 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 ZNF711Q9Y462 761 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 UBA6A0AVT1 1052 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 ARPC2O15144 300 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 F9P00740 461 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMC3-201ENST00000361804 IMPDH1P20839 514 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 SLC6A2P23975 617 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 STX1BP61266 288 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 GDF6Q6KF10 455 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 C8orf82Q6P1X6 216 aaPredicted RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 TTC9BQ8N6N2 239 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 TCF12Q99081 682 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ANKRD60Q9BZ19 345 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ENTPD7Q9NQZ7 604 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 POLG2Q9UHN1 485 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ASPDHA6ND91 283 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 BMP1P13497 986 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 MTHFD2P13995 350 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 GFAPP14136 432 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PAMP19021 973 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 ELK4P28324 431 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 CCR3P51677 355 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 IST1P53990 364 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PIGFQ07326 219 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 PSMD5Q16401 504 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 INTS6LQ5JSJ4 861 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 TMEM126BQ8IUX1 230 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 EML4Q9HC35 981 aaKnown RBP10.56□□□□□ -0.72
SMC3-201ENST00000361804 THEGQ9P2T0 379 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 SARDHQ9UL12 918 aa10.56□□□□□ -0.72
SMC3-201ENST00000361804 LAMA1P25391 3075 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 J3QRK9 145 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 ANGPT2O15123 496 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 GOT2P00505 430 aaKnown RBP10.55□□□□□ -0.72
SMC3-201ENST00000361804 GRK4P32298 578 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 LEPRP48357 1165 aaKnown RBP10.55□□□□□ -0.72
SMC3-201ENST00000361804 UFM1P61960 85 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 NKX3-2P78367 333 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 BNIP3Q12983 259 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 GPNMBQ14956 572 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 OGFOD2Q6N063 350 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 PPP4R4Q6NUP7 873 aa10.55□□□□□ -0.72
SMC3-201ENST00000361804 TMEM214Q6NUQ4 689 aaKnown RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms