RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 PDIK1LQ8N165 341 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 TRAM1L1Q8N609 369 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 GPR161Q8N6U8 529 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 PPHLN1Q8NEY8 458 aaKnown RBP13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 RUBCNQ92622 972 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 KLK6Q92876 244 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 LRRC39Q96DD0 335 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 KLHDC7BQ96G42 594 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 BMFQ96LC9 184 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 SLC6A18Q96N87 628 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 LRRC1Q9BTT6 524 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 KIFC1Q9BW19 673 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 CARD6Q9BX69 1037 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 PHACTR1Q9C0D0 580 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 ABCG8Q9H221 673 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 ARRDC1-AS1Q9H2J1 176 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 ANAPC5Q9UJX4 755 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 SLC6A14Q9UN76 642 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 TCAF1Q9Y4C2 921 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 CEP192Q8TEP8 1941 aa13.78□□□□□ -0.2
NSMCE1-201ENST00000361439 TLR4O00206 839 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 KHNYNO15037 678 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 DFNA5O60443 496 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 SYPP08247 313 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 IGFALSP35858 605 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 ITGA8P53708 1063 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 C21orf59P57076 290 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 SESN2P58004 480 aaPredicted RBP13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 ACVR1Q04771 509 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 ITGA9Q13797 1035 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 INPP5AQ14642 412 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 OTOGLQ3ZCN5 2332 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 USP34Q70CQ2 3546 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 SDK1Q7Z5N4 2213 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 CCNJLQ8IV13 435 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 NOA1Q8NC60 698 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 GPR26Q8NDV2 337 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 OR4K2Q8NGD2 314 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 SGSM3Q96HU1 749 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 NAT9Q9BTE0 207 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 NUSAP1Q9BXS6 441 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 TEX101Q9BY14 249 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 FOXP3Q9BZS1 431 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 WDR26Q9H7D7 661 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 ERVMER34-1Q9H9K5 563 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 CAPN10Q9HC96 672 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 FZD3Q9NPG1 666 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 IL26Q9NPH9 171 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 MBNL1Q9NR56 388 aaKnown RBP13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 NCDNQ9UBB6 729 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 SNX24Q9Y343 169 aa13.77□□□□□ -0.21
NSMCE1-201ENST00000361439 TNRC6BQ9UPQ9 1833 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 GLYATL1P3A0A0U1RQE8 302 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 A0A0U1RQS6 177 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 POM121BA6NF01 834 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 BHMG1C9JSJ3 638 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 TP73O15350 636 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 THEGLP0DJG4 465 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 KELP23276 732 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 HTR1BP28222 390 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 GPR1P46091 355 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 ARL4CP56559 192 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 KIAA1024LP59773 190 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 CSRP2Q16527 193 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 TRIM61Q5EBN2 209 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 TSTD2Q5T7W7 516 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 RAET1GQ6H3X3 334 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 Q6ZSR6 202 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 OXR1Q8N573 874 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 ART4Q93070 314 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 SCAMP4Q969E2 229 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 VPS35Q96QK1 796 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 APOOQ9BUR5 198 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 TRIM31Q9BZY9 425 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 TSPYL1Q9H0U9 437 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 PHPT1Q9NRX4 125 aaPredicted RBP13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 FAM114A2Q9NRY5 505 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 PIH1D1Q9NWS0 290 aaKnown RBP13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 SAMD15Q9P1V8 674 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 SOX13Q9UN79 622 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 ANKRD6Q9Y2G4 727 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 CACNA1EQ15878 2313 aa13.76□□□□□ -0.21
NSMCE1-201ENST00000361439 ATXN2Q99700 1313 aaKnown RBP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SPTY2D1-AS1A0A0U1RR47 76 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 FAM237BA0A1B0GVD1 139 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 AGAP14A8MT82 685 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GPR89AB7ZAQ6 455 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GOLGA8MH3BSY2 632 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 CACNB4O00305 520 aaPredicted RBP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 TNFRSF10CO14798 259 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 EIF3HO15372 352 aaKnown RBP eCLIP13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 TTC4O95801 387 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 SOD1P00441 154 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 WNT1P04628 370 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 PCCBP05166 539 aa13.75□□□□□ -0.21
NSMCE1-201ENST00000361439 GPR89BP0CG08 455 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms