RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 ARFGEF2Q9Y6D5 1785 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 AIREO43918 545 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 UGT2B4P06133 528 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TTPAP49638 278 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 GTF2A2P52657 109 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PRKCQQ04759 706 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CCNIQ14094 377 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CELF3Q5SZQ8 465 aaKnown RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 GPR158Q5T848 1215 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 RHBDF2Q6PJF5 856 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 PCDH19Q8TAB3 1148 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ZNF384Q8TF68 577 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 HEXDCQ8WVB3 486 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 REPS1Q96D71 796 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ARL15Q9NXU5 204 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TMED5Q9Y3A6 229 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 C9JVG2 144 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 RAB25P57735 213 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 WSCD1Q658N2 575 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TXNRD3NBQ6F5E7 133 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TMEM214Q6NUQ4 689 aaKnown RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 ABHD15Q6UXT9 468 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ADGRG6Q86SQ4 1221 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 GRPEL2Q8TAA5 225 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 GLOD4Q9HC38 313 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 MAGEE1Q9HCI5 957 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CLCA2Q9UQC9 943 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 SLIT2O94813 1529 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 HAT1O14929 419 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CFHP08603 1231 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 YAP1P46937 504 aaKnown RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 OVOS1Q6IE37 1185 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 TCAIMQ8N3R3 496 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 RTL3Q8N8U3 475 aaKnown RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 BHMTQ93088 406 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 RNF19AQ9NV58 838 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ZNF358Q9NW07 568 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 CCDC59Q9P031 241 aaKnown RBP13.93□□□□□ -0.18
SMC5-201ENST00000361138 CNTN6Q9UQ52 1028 aa13.93□□□□□ -0.18
SMC5-201ENST00000361138 ELOVL7A1L3X0 281 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 J3QRK9 145 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 TIFABQ6ZNK6 161 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PTCHD4Q6ZW05 846 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 USP43Q70EL4 1123 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 UXS1Q8NBZ7 420 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 FBXL8Q96CD0 374 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 MRPL48Q96GC5 212 aaKnown RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 DUSP16Q9BY84 665 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 GLIS2Q9BZE0 524 aaPredicted RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 SP140LQ9H930 580 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ATP13A1Q9HD20 1204 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 TRPC4Q9UBN4 977 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PTBP2Q9UKA9 531 aaKnown RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMC5-201ENST00000361138 PMF1-BGLAPU3KQ54 211 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 RFXANKO14593 260 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 OR56A5P0C7T3 313 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ASPAP45381 313 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ENTPD1P49961 510 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ZNF516Q92618 1163 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 LINGO1Q96FE5 620 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 MLPHQ9BV36 600 aaPredicted RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 H0Y858 1186 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PDLIM1O00151 329 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PIP5K1BO14986 540 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 NOBOXO60393 691 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 FTH1P02794 183 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 IFNGR2P38484 337 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PHC1P78364 1004 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PCLAFQ15004 111 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 TLR1Q15399 786 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 CA9Q16790 459 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 SLC35G1Q2M3R5 365 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 NBPF12Q5TAG4 269 aaPredicted RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 EEF1DP3Q658K8 133 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 FNDC8Q8TC99 324 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 TRIM8Q9BZR9 551 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 H3BMM5 538 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 SSNA1O43805 119 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 FABP3P05413 133 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 EPB42P16452 691 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 AHSA2Q719I0 299 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 KAT8Q9H7Z6 458 aaKnown RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 OAZ3Q9UMX2 235 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ANXA5P08758 320 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 RAP2AP10114 183 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PAICSP22234 425 aaKnown RBP13.92□□□□□ -0.18
SMC5-201ENST00000361138 PTPN9P43378 593 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ACSM2AQ08AH3 577 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ELP6Q0PNE2 266 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PTPRNQ16849 979 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ACSM2BQ68CK6 577 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 ELMSAN1Q6PJG2 1045 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 KIAA0319LQ8IZA0 1049 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 LGI2Q8N0V4 545 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 PIK3C3Q8NEB9 887 aa13.92□□□□□ -0.18
SMC5-201ENST00000361138 DENND1AQ8TEH3 1009 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms