RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 C2orf15Q8WU43 125 aaKnown RBP12.41□□□□□ -0.42
UBA3-202ENST00000361055 PBXIP1Q96AQ6 731 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 SLCO4A1Q96BD0 722 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 ZNF419Q96HQ0 510 aaPredicted RBP12.41□□□□□ -0.42
UBA3-202ENST00000361055 C17orf80Q9BSJ5 609 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 FSD1LQ9BXM9 530 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 PCDHAC1Q9H158 963 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBA3-202ENST00000361055 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 CEP290O15078 2479 aa12.41□□□□□ -0.42
UBA3-202ENST00000361055 PRORSD1PA6NEY8 169 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 IRAK2O43187 625 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 PAGE1O75459 146 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 HLA-DQB2P05538 268 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 SPATA31D3P0C874 917 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CCDC166P0CW27 439 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 KCNA5P22460 613 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 OR1D2P34982 312 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CREMQ03060 361 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 UBE3AQ05086 875 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 RBM20Q5T481 1227 aaKnown RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 SPATA31D4Q6ZUB0 917 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 LARP4Q71RC2 724 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBA3-202ENST00000361055 TSPAN14Q8NG11 270 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 LRTOMTQ8WZ04 291 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 OLFM1Q99784 485 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CLSTN3Q9BQT9 956 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 RHOBTB2Q9BYZ6 727 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 UNKQ9C0B0 810 aaKnown RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 SLC25A51Q9H1U9 297 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ABI2Q9NYB9 513 aaPredicted RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 CCDC167Q9P0B6 97 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 VWA7Q9Y334 891 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 MTMR11A4FU01 709 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CCDC160A6NGH7 325 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 MRASO14807 208 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ARHGEF15O94989 841 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 H6PDO95479 791 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 BMP2P12643 396 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CCR1P32246 355 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 WNT3AP56704 352 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 KDELC1Q6UW63 502 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 RNF19BQ6ZMZ0 732 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 CARM1Q86X55 608 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ANKFN1Q8N957 763 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 B4GALNT2Q8NHY0 566 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 FAM81AQ8TBF8 368 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ZUFSPQ96AP4 578 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ROPN1LQ96C74 230 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 L3HYPDHQ96EM0 354 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 FCRL2Q96LA5 508 aaPredicted RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 PBX4Q9BYU1 374 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ATP13A1Q9HD20 1204 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 TNFRSF12AQ9NP84 129 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 TIMMDC1Q9NPL8 285 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ABCC13Q9NSE7 274 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 ARMC1Q9NVT9 282 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 MTF2Q9Y483 593 aaPredicted RBP12.4□□□□□ -0.42
UBA3-202ENST00000361055 CEPT1Q9Y6K0 416 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 AK5Q9Y6K8 562 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 NUP205Q92621 2012 aa12.4□□□□□ -0.42
UBA3-202ENST00000361055 WASH4PA8MWX3 477 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 AURKAO14965 403 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ADAM12O43184 909 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SLC7A4O43246 635 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 LILRB3O75022 631 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 STAMBPO95630 424 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ZNF23P17027 643 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 RPL17P18621 184 aaKnown RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 GRIK1P39086 918 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 MAGEA11P43364 429 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ALDH3B2P48448 385 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 NRG1Q02297 640 aaPredicted RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 SEPT6Q14141 434 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 RAB30Q15771 203 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 PPP4R4Q6NUP7 873 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 DHFR2Q86XF0 187 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 PCYOX1LQ8NBM8 494 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 ZNF461Q8TAF7 563 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 FATE1Q969F0 183 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 GSTO2Q9H4Y5 243 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 OSER1Q9NX31 292 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 HSFX1Q9UBD0 423 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 FIS1Q9Y3D6 152 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 TNRC18O15417 2968 aaPredicted RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 COL4A4P53420 1690 aaPredicted RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 H3BNH8 94 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 H3BSA7 217 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SRP72O76094 671 aaKnown RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 WISP3O95389 354 aaPredicted RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 PBX2P40425 430 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 CHRNA4P43681 627 aa12.39□□□□□ -0.43
UBA3-202ENST00000361055 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
UBA3-202ENST00000361055 ERVK-21P61565 698 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms