RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 ANKMY2Q8IV38 441 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 GSPT2Q8IYD1 628 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 GPR26Q8NDV2 337 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 OR13J1Q8NGT2 312 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DTX3LQ8TDB6 740 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 PYROXD1Q8WU10 500 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 GAB3Q8WWW8 586 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 MFSD3Q96ES6 412 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DTD2Q96FN9 168 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CDKN2AIPNLQ96HQ2 116 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 TRIM56Q9BRZ2 755 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC17A9Q9BYT1 436 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CDH19Q9H159 772 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 PLAC1Q9HBJ0 212 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ZSCAN32Q9NX65 697 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ZC3H7BQ9UGR2 993 aaKnown RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 COQ6Q9Y2Z9 468 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM169AQ9Y6X4 670 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DOCK9Q9BZ29 2069 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 GVINP1Q7Z2Y8 2422 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ZCWPW2A0A1B0GU75 182 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CCDC78A2IDD5 438 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 HRO43593 1189 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 SLC4A1P02730 911 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 POLBP06746 335 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 BCKDHBP21953 392 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CNR2P34972 360 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ARSDP51689 593 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DCDC1P59894 354 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DPTQ07507 201 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 SGCGQ13326 291 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 SLMAPQ14BN4 828 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 CES3Q6UWW8 571 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ZNF765Q7L2R6 523 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 C11orf74Q86VG3 221 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ZBTB44Q8NCP5 570 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 BIRC7Q96CA5 298 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 TBATAQ96M53 351 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 LENG8Q96PV6 779 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 PLEKHG4BQ96PX9 1271 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 TXLNGYQ9BZA5 131 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 DUSP15Q9H1R2 295 aaPredicted RBP12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 ABCG8Q9H221 673 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 FAM83DQ9H4H8 585 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 IL26Q9NPH9 171 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 RPS6KL1Q9Y6S9 549 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 R4GN57 208 aa12.37□□□□□ -0.43
NIF3L1-201ENST00000359683 VPS13AQ96RL7 3174 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 ABCA7Q8IZY2 2146 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 GOLGA8CPA6NN73 597 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 MAP3K13O43283 966 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 RPP40O75818 363 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 MAT2AP31153 395 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 NUDT1P36639 197 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 SPAM1P38567 509 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 ARCN1P48444 511 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 TMPRSS15P98073 1019 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 XIAPP98170 497 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 RPL6Q02878 288 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 PEX6Q13608 980 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 WSCD2Q2TBF2 565 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 SPANXN3Q5MJ09 141 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 KIAA0930Q6ICG6 404 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 UNC5AQ6ZN44 842 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 PALM2Q8IXS6 379 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 AENQ8WTP8 325 aaKnown RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 KLK6Q92876 244 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 SCAMP4Q969E2 229 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 HDAC10Q969S8 669 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 ZNF669Q96BR6 464 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 CENPTQ96BT3 561 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 NUS1Q96E22 293 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 SGSM3Q96HU1 749 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 C9orf72Q96LT7 481 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 KLF6Q99612 283 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 EBF2Q9HAK2 575 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 CD84Q9UIB8 345 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 FKBPLQ9UIM3 349 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 APPL1Q9UKG1 709 aa12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.36□□□□□ -0.43
NIF3L1-201ENST00000359683 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SCN8AQ9UQD0 1980 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 CCL22O00626 93 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 GAPDHSO14556 408 aaPredicted RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 LILRB5O75023 590 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 FSBPO95073 299 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 GSTA2P09210 222 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 TSHRP16473 764 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 ARNTP27540 789 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 GPX6P59796 221 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SRSF5Q13243 272 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 FRG1Q14331 258 aaKnown RBP12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 CRYMQ14894 314 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 LRRC14Q15048 493 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 KYNUQ16719 465 aa12.35□□□□□ -0.43
NIF3L1-201ENST00000359683 SETMARQ53H47 684 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms