RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PMF1Q6P1K2 205 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 PAGE2Q7Z2X7 111 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 PIGWQ7Z7B1 504 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 RBM15BQ8NDT2 890 aaKnown RBP12.21□□□□□ -0.45
DNMT1-202ENST00000359526 NARS2Q96I59 477 aaKnown RBP12.21□□□□□ -0.45
DNMT1-202ENST00000359526 DEFB118Q96PH6 123 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 OSBPL7Q9BZF2 842 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 RETREG1Q9H6L5 497 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 ARHGEF3Q9NR81 526 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 ZNF232Q9UNY5 417 aa12.21□□□□□ -0.45
DNMT1-202ENST00000359526 RBMX2Q9Y388 322 aaKnown RBP12.21□□□□□ -0.45
DNMT1-202ENST00000359526 SLC22A2O15244 555 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 SPIDRQ14159 915 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 PTPN20Q4JDL3 420 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 RAP1GAP2Q684P5 730 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 AKAP14Q86UN6 197 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 EFCAB3Q8N7B9 438 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 RTL3Q8N8U3 475 aaKnown RBP12.21□□□□□ -0.46
DNMT1-202ENST00000359526 ANKRD49Q8WVL7 239 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 SLC47A1Q96FL8 570 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 PGLYRP2Q96PD5 576 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 ATP13A3Q9H7F0 1226 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 GLOD4Q9HC38 313 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 FNIP2Q9P278 1114 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 COL22A1Q8NFW1 1626 aaPredicted RBP12.21□□□□□ -0.46
DNMT1-202ENST00000359526 MDM4O15151 490 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 SPTLC1O15269 473 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 SCNN1GP51170 649 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 GRB14Q14449 540 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 CYP1B1Q16678 543 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 PPP1R26Q5T8A7 1209 aaPredicted RBP12.21□□□□□ -0.46
DNMT1-202ENST00000359526 AMIGO2Q86SJ2 522 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 FUBP3Q96I24 572 aaKnown RBP eCLIP12.21□□□□□ -0.46
DNMT1-202ENST00000359526 VPS35Q96QK1 796 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 MBD2Q9UBB5 411 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 RAPGEFL1Q9UHV5 662 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 SAMD4AQ9UPU9 718 aaKnown RBP12.21□□□□□ -0.46
DNMT1-202ENST00000359526 CARD8Q9Y2G2 431 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 USP54Q70EL1 1684 aa12.21□□□□□ -0.46
DNMT1-202ENST00000359526 CCDC182A6NF36 153 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TRMUO75648 421 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 PCDH8O95206 1070 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 INHAP05111 366 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 C2P06681 752 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 IL12AP29459 219 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CDYL2Q8N8U2 506 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 OR2T34Q8NGX1 318 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 OR2T3Q8NH03 318 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 MOSPD2Q8NHP6 518 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 RPRD1BQ9NQG5 326 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 DNAAF2Q9NVR5 837 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 C5orf60A6NFR6 353 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 SCNN1AP37088 669 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 PTSQ03393 145 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 GRIK5Q16478 980 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 UGCGQ16739 394 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TEX44Q53QW1 395 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 EGFLAMQ63HQ2 1017 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 ZYG11AQ6WRX3 759 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TCAIMQ8N3R3 496 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 MAB21L3Q8N8X9 362 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 OR52L1Q8NGH7 329 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 ELMO1Q92556 727 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 PLD4Q96BZ4 506 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 MTFMTQ96DP5 389 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 SYNDIG1Q9H7V2 258 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 MRPL39Q9NYK5 338 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TDRKHQ9Y2W6 561 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 MRPS23Q9Y3D9 190 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TELO2Q9Y4R8 837 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 SMIM22K7EJ46 135 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 GCATO75600 419 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TCEA3O75764 348 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 IPO13O94829 963 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 GJB1P08034 283 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 HNRNPLP14866 589 aaKnown RBP eCLIP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 GTF2E2P29084 291 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CSNK2BP67870 215 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CTBP1Q13363 440 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 LPCAT4Q643R3 524 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TRIM40Q6P9F5 258 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 SLC26A9Q7LBE3 791 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 IL31RAQ8NI17 732 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 WFIKKN2Q8TEU8 576 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CSPG4P5Q96PW8 444 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 BTRCQ9Y297 605 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 A0A0J9YYE9 177 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 G3V2T6 193 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CILPO75339 1184 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 WNT3AP56704 352 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 PLCH1Q4KWH8 1693 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 DENND5AQ6IQ26 1287 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 GALNT18Q6P9A2 607 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 VN1R5Q7Z5H4 357 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 TDRD1Q9BXT4 1180 aaKnown RBP12.2□□□□□ -0.46
DNMT1-202ENST00000359526 SDCBP2Q9H190 292 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 CREBZFQ9NS37 354 aa12.2□□□□□ -0.46
DNMT1-202ENST00000359526 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms