RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SLC15A3Q8IY34 581 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 BBS5Q8N3I7 341 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CPSF7Q8N684 471 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF513Q8N8E2 541 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 PPTC7Q8NI37 304 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 LRRC58Q96CX6 371 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 RAD21L1Q9H4I0 556 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 MARCH4Q9P2E8 410 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 CIDEBQ9UHD4 219 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 TRMT6Q9UJA5 497 aaKnown RBP6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF112Q9UJU3 913 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 USP3Q9Y6I4 520 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 ANKRD31Q8N7Z5 1873 aa6.56□□□□□ -1.36
CSDE1-203ENST00000358528 NPEPPSL1A6NEC2 478 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM247A6NEH6 219 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 KPNA6O60684 536 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CBFA2T3O75081 653 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SBK3P0C264 359 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CAPN3P20807 821 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CAPGP40121 348 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ARSDP51689 593 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 IST1P53990 364 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 UFM1P61960 85 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TWF1Q12792 350 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PTPRNQ16849 979 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PLA2G4EQ3MJ16 856 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FAM98BQ52LJ0 330 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TECRLQ5HYJ1 363 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TSTD2Q5T7W7 516 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 BROXQ5VW32 411 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 OVOS1Q6IE37 1185 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HMBOX1Q6NT76 420 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PRMT9Q6P2P2 845 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 RETREG3Q86VR2 466 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SNX29P2Q8IUI4 249 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MFSD6LQ8IWD5 586 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MICU2Q8IYU8 434 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 C8orf59Q8N0T1 100 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CFAP52Q8N1V2 620 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HM13Q8TCT9 377 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PSMG2Q969U7 264 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CCDC97Q96F63 343 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF597Q96LX8 424 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DACH2Q96NX9 599 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MUS81Q96NY9 551 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HOPXQ9BPY8 73 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 HIPK3Q9H422 1215 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 EPB41L1Q9H4G0 881 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 AGO3Q9H9G7 860 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 RIC8BQ9NVN3 520 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ST14Q9Y5Y6 855 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 K7EPI3 171 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MATN3O15232 486 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC22A2O15244 555 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CD3EAPO15446 510 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SNAP91O60641 907 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC22A3O75751 556 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MMP3P08254 477 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SMPD1P17405 629 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 OR1E1P30953 314 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 AFF1P51825 1210 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DGKQP52824 942 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CDKN2DP55273 166 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MCCD1P59942 119 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CLCQ05315 142 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TRAP1Q12931 704 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PPIL2Q13356 520 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 LRP8Q14114 963 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ACAP2Q15057 778 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PSMD5Q16401 504 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 DDR2Q16832 855 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PAGE2BQ5JRK9 111 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC2A7Q6PXP3 512 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PLD3Q8IV08 490 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ZCCHC7Q8N3Z6 543 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TMEM40Q8WWA1 233 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.55□□□□□ -1.364e-6■■□□□ 14.1
CSDE1-203ENST00000358528 C1QTNF1Q9BXJ1 281 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 RIBC2Q9H4K1 309 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 RNF181Q9P0P0 153 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 KIF17Q9P2E2 1029 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 BLOC1S6Q9UL45 172 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SLC12A8A0AV02 714 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TRIM43BA6NCK2 446 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 A8MX80 341 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ZNF487B1APH4 448 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SOCS7O14512 581 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 OR4F21O95013 312 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 FKBP9O95302 570 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CST1P01037 141 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 ODC1P11926 461 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 IMPDH1P20839 514 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 PRKACGP22612 351 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CCNCP24863 283 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CA8P35219 290 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 MTHFRP42898 656 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 CLK1P49759 484 aaKnown RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 KPNA1P52294 538 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-203ENST00000358528 SH3BP2P78314 561 aa6.55□□□□□ -1.36
CSDE1-203ENST00000358528 TNK2Q07912 1038 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms