RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 TAS2R7Q9NYW3 318 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RGS17Q9UGC6 210 aaPredicted RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 C19orf81C9J6K1 198 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 LINGO3P0C6S8 592 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ARP10275 920 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PRKAR2AP13861 404 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 MAPK12P53778 367 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 JAM2P57087 298 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 C6orf89Q6UWU4 347 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 TOR1AIP2Q8NFQ8 470 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PTCD2Q8WV60 388 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ERLEC1Q96DZ1 483 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 ZNF607Q96SK3 696 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RGL2O15211 777 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 AKAP8O43823 692 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 UGT2B17O75795 530 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 IPO13O94829 963 aaKnown RBP8.76□□□□□ -1.01
COL6A6-201ENST00000358511 OR5F1O95221 314 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RARRES1P49788 294 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 SWI5Q1ZZU3 235 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 PPM1MQ96MI6 270 aa8.76□□□□□ -1.01
COL6A6-201ENST00000358511 RRN3P2A6NIE6 340 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 SLC28A1O00337 649 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 NOL4O94818 638 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 IRF1P10914 325 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 NPR2P20594 1047 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 STARD3Q14849 445 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CMPK2Q5EBM0 449 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 POTEHQ6S545 545 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 COMMD2Q86X83 199 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 IPCEF1Q8WWN9 437 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 LPGAT1Q92604 370 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FBXO32Q969P5 355 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 POPDC2Q9HBU9 364 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PAK6Q9NQU5 681 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 IL17RBQ9NRM6 502 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 MFHAS1Q9Y4C4 1052 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PTPN1P18031 435 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ITGA3P26006 1051 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FOXN2P32314 431 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 GALNT3Q14435 633 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 C1orf186Q6ZWK4 172 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 HDAC10Q969S8 669 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 HSD3B7Q9H2F3 369 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 SETD4Q9NVD3 440 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 GABBR2O75899 941 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CCNB2O95067 398 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FABP3P05413 133 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ATP6V0D1P61421 351 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CYP4F8P98187 520 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CD83Q01151 205 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 LIPEQ05469 1076 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PTP4A2Q12974 167 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CYP1B1Q16678 543 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 IQSEC1Q6DN90 963 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CMC1Q7Z7K0 106 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 IRF2BP1Q8IU81 584 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ZC3H7AQ8IWR0 971 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PHC2Q8IXK0 858 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 UNC5BQ8IZJ1 945 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 BTRCQ9Y297 605 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 MAN2B2Q9Y2E5 1009 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 OR1E1P30953 314 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 OMPP47874 163 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 GLYATQ6IB77 296 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ZPBP2Q6X784 338 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 R3HCC1LQ7Z5L2 792 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 BBS4Q96RK4 519 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ABCB9Q9NP78 766 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TLR8Q9NR97 1041 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 EIF3KQ9UBQ5 218 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ELOVL7A1L3X0 281 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 METTL21EPA6NDL7 271 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FOXO6A8MYZ6 492 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PRRG1O14668 218 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CYP7B1O75881 506 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TYMPP19971 482 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ALDH3A2P51648 485 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 RNASEH2BQ5TBB1 312 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TRPV3Q8NET8 790 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 NLNQ9BYT8 704 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 WDR55Q9H6Y2 383 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 CNOT6Q9ULM6 557 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FAM149AA5PLN7 773 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FECHP22830 423 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 PTX3P26022 381 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 BTN3A2P78410 334 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 RPL6Q02878 288 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 TIGD6Q17RP2 521 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 MIB1Q86YT6 1006 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 BRSK2Q8IWQ3 736 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 C12orf43Q96C57 262 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 ACP6Q9NPH0 428 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 POLR3HQ9Y535 204 aaPredicted RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 MYO5AQ9Y4I1 1855 aaKnown RBP8.75□□□□□ -1.01
COL6A6-201ENST00000358511 DIP2CQ9Y2E4 1556 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 FABP12A6NFH5 140 aa8.75□□□□□ -1.01
COL6A6-201ENST00000358511 SERPINB7O75635 380 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms