RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 C10orf142B7Z368 130 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 BPIP17213 487 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 CD27P26842 260 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SPAM1P38567 509 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 DCDC1P59894 354 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 TCF15Q12870 199 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 AGERQ15109 404 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 IRF4Q15306 451 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ERCC6LQ2NKX8 1250 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 HP1BP3Q5SSJ5 553 aaPredicted RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 ARMC3Q5W041 872 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 AGGF1Q8N302 714 aaeCLIP15.2■□□□□ 0.02
TPM1-206ENST00000358278 DENND6BQ8NEG7 585 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 PEX13Q92968 403 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SCAMP4Q969E2 229 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 LRRC39Q96DD0 335 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SERAC1Q96JX3 654 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 ZC3H10Q96K80 434 aaKnown RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 ZNF778Q96MU6 729 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 PLEKHG4BQ96PX9 1271 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 KIFC1Q9BW19 673 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 CDH19Q9H159 772 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 FAM83DQ9H4H8 585 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 SAYSD1Q9NPB0 183 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 NLE1Q9NVX2 485 aaPredicted RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 FKBPLQ9UIM3 349 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
TPM1-206ENST00000358278 TDRD6O60522 2096 aaKnown RBP15.2■□□□□ 0.02
TPM1-206ENST00000358278 E7ESA3 106 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 PRAMEF26H0Y7S4 382 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 CCL22O00626 93 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 EIF3HO15372 352 aaKnown RBP eCLIP15.19■□□□□ 0.02
TPM1-206ENST00000358278 PCCBP05166 539 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 ELK3P41970 407 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 WSCD2Q2TBF2 565 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 RAET1GQ6H3X3 334 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 FAM151BQ6UXP7 276 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 ZNF765Q7L2R6 523 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 ANKMY2Q8IV38 441 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 GPR26Q8NDV2 337 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 ZNF669Q96BR6 464 aaPredicted RBP15.19■□□□□ 0.02
TPM1-206ENST00000358278 NAT9Q9BTE0 207 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 RIOK2Q9BVS4 552 aaKnown RBP15.19■□□□□ 0.02
TPM1-206ENST00000358278 SPATA16Q9BXB7 569 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 PHACTR1Q9C0D0 580 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 ABCG8Q9H221 673 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 EBF2Q9HAK2 575 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 NFKBIL1Q9UBC1 381 aaPredicted RBP15.19■□□□□ 0.02
TPM1-206ENST00000358278 SLC2A6Q9UGQ3 507 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 RAB23Q9ULC3 237 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 RPS6KL1Q9Y6S9 549 aa15.19■□□□□ 0.02
TPM1-206ENST00000358278 TMEM131Q92545 1883 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 GLYATL1P3A0A0U1RQE8 302 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 FAM237BA0A1B0GVD1 139 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 FPGTO14772 594 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 RAD51BO15315 384 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 POLBP06746 335 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 PGAM1P18669 254 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 PAMP19021 973 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 ITPKAP23677 461 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 MAOBP27338 520 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 NMBRP28336 390 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 ECHS1P30084 290 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 PTPN5P54829 565 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 PRAMEP78395 509 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 FASTKD3Q14CZ7 662 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 LPAL2Q16609 132 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 HENMT1Q5T8I9 393 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 CES3Q6UWW8 571 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 GPR161Q8N6U8 529 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 TP53I13Q8NBR0 393 aaPredicted RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 FBXO36Q8NEA4 188 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 OR13J1Q8NGT2 312 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 CENPTQ96BT3 561 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 MFSD3Q96ES6 412 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 CFAP36Q96G28 342 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 LENG8Q96PV6 779 aaPredicted RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 KLF6Q99612 283 aaPredicted RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 EBNA1BP2Q99848 306 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 C19orf43Q9BQ61 176 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 TRIM56Q9BRZ2 755 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 ZSCAN5AQ9BUG6 496 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 TSPYL1Q9H0U9 437 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 IRF2BPLQ9H1B7 796 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 AASDHPPTQ9NRN7 309 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 ZC3H7BQ9UGR2 993 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 APPL1Q9UKG1 709 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 RIMKLBQ9ULI2 386 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 TEX264Q9Y6I9 313 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 ADAMTS9Q9P2N4 1935 aa15.18■□□□□ 0.02
TPM1-206ENST00000358278 ATXN2Q99700 1313 aaKnown RBP15.18■□□□□ 0.02
TPM1-206ENST00000358278 USP1O94782 785 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 PRAMEF1O95521 474 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 TSHRP16473 764 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 IGFALSP35858 605 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 GPR1P46091 355 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 DPTQ07507 201 aa15.17■□□□□ 0.02
TPM1-206ENST00000358278 ESRP1Q6NXG1 681 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms