RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 DNAJA4Q8WW22 397 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 ATP13A3Q9H7F0 1226 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 CLDND1Q9NY35 253 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ING4Q9UNL4 249 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 HBS1LQ9Y450 684 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 RIMS1Q86UR5 1692 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 CCRL2O00421 344 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 CASKO14936 926 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 RAD51CO43502 376 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 FTH1P02794 183 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 VDRP11473 427 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 MAGP20916 626 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ADORA2AP29274 412 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ATP5C1P36542 298 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 SLC1A2P43004 574 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ZBTB6Q15916 424 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 BMT2Q1RMZ1 405 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 INO80DQ53TQ3 878 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 WASHC2DQ5SRD0 308 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TMPRSS11BQ86T26 416 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ZNF554Q86TJ5 538 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SCUBE3Q8IX30 993 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 CLIP4Q8N3C7 705 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SETD9Q8NE22 299 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 EPS8L3Q8TE67 593 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 NINJ1Q92982 152 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 UBXN10Q96LJ8 280 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 PLA2G12BQ9BX93 195 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TMEM121BQ9BXQ6 578 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 MUSKO15146 869 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 HSPA12AO43301 675 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 NUAK1O60285 661 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.852e-8■□□□□ 10.9
CHD3-202ENST00000358181 SELENOVP59797 346 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 PDIA5Q14554 519 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 FBXO47Q5MNV8 452 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ZNF808Q8N4W9 903 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 TRIM43Q96BQ3 446 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 TMEM176AQ96HP8 235 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 MEAF6Q9HAF1 191 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 NMRAL1Q9HBL8 299 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SGK2Q9HBY8 427 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ETAA1Q9NY74 926 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 F9P00740 461 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 RPL38P63173 70 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 MSANTD2Q6P1R3 559 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 FAM131AQ6UXB0 335 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 REXO1L1PQ8IX06 675 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SPATA6LQ8N4H0 392 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TMEM161BQ8NDZ6 487 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 AP2M1Q96CW1 435 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 DCLK3Q9C098 648 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 FBRSQ9HAH7 460 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 NCKIPSDQ9NZQ3 722 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 MANSC4A6NHS7 340 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 H0YGN5 161 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 USP12O75317 370 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ITPKAP23677 461 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 GABRR2P28476 465 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 EFR3AQ14156 821 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 KLHL26Q53HC5 615 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SLC47A2Q86VL8 602 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TOR1AIP2Q8NFQ8 470 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 C12orf66Q96MD2 445 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 DNAJC28Q9NX36 388 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 HAO2Q9NYQ3 351 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ENOPH1Q9UHY7 261 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TLX3O43711 291 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 PPM1BO75688 479 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 UGT2B17O75795 530 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 CD44P16070 742 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 FAUP35544 74 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 VHLP40337 213 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 MDH1P40925 334 aaKnown RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 GNPDA1P46926 289 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SEPHS1P49903 392 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 LAMTOR4Q0VGL1 99 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 C5orf22Q49AR2 442 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SBK1Q52WX2 424 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 SPATC1Q76KD6 591 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 LZTR1Q8N653 840 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 HERVK_113Q902F9 699 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 TMEM125Q96AQ2 219 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 FBXO6Q9NRD1 293 aaPredicted RBP9.75□□□□□ -0.85
CHD3-202ENST00000358181 HPF1Q9NWY4 346 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 ZNF639Q9UID6 485 aa9.75□□□□□ -0.85
CHD3-202ENST00000358181 BAZ2BQ9UIF8 2168 aaKnown RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 ISPDA4D126 451 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 AQP1P29972 269 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 MGAT5Q09328 741 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 RASGEF1BQ0VAM2 473 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 FAM187BQ17R55 369 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 INAVAQ3KP66 663 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 RAD9BQ6WBX8 426 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ZNF567Q8N184 647 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ZNF540Q8NDQ6 660 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 ADAMTS15Q8TE58 950 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 EXOSC8Q96B26 276 aaKnown RBP9.74□□□□□ -0.85
CHD3-202ENST00000358181 TOR3AQ9H497 397 aa9.74□□□□□ -0.85
CHD3-202ENST00000358181 MARCH2Q9P0N8 246 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms