RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CDH5P33151 784 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CDC42P60953 191 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 TATDN1Q6P1N9 297 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 C3orf33Q6P1S2 294 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 WDR59Q6PJI9 974 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 COMTD1Q86VU5 262 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 TMC8Q8IU68 726 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF565Q8N9K5 539 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SHC3Q92529 594 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 THOC3Q96J01 351 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SPATC1LQ9H0A9 340 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ALG9Q9H6U8 611 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 DDX18Q9NVP1 670 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GCC2Q8IWJ2 1684 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 C2orf72A6NCS6 295 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LGALS16A8MUM7 142 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 C22orf31O95567 290 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 NFATC1O95644 943 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LTA4HP09960 611 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PTX3P26022 381 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MAGEA12P43365 314 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GALCP54803 685 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MYL6P60660 151 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MAXP61244 160 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PKP1Q13835 747 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 FASTKQ14296 549 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GRM2Q14416 872 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CDK10Q15131 360 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PPA1Q15181 289 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 TBRG1Q3YBR2 411 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SLC9B1Q4ZJI4 515 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 WASHC2DQ5SRD0 308 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MZT2BQ6NZ67 158 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 C1orf186Q6ZWK4 172 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SLC29A4Q7RTT9 530 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LRRN4Q8WUT4 740 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 KCTD4Q8WVF5 259 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 NELL1Q92832 810 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MMABQ96EY8 250 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 NPAS2Q99743 824 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LRRC1Q9BTT6 524 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SLC5A7Q9GZV3 580 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 FN3KQ9H479 309 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 EFCAB1Q9HAE3 211 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SERINC1Q9NRX5 453 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CCDC167Q9P0B6 97 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 IL20RAQ9UHF4 553 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MTO1Q9Y2Z2 717 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 USP42Q9H9J4 1324 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 EDC4Q6P2E9 1401 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 A0A1W2PPL8 197 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 AQP1P29972 269 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 RPL22P35268 128 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 BACE1P56817 501 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 S100A10P60903 97 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ZC3H12AQ5D1E8 599 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CDKL4Q5MAI5 379 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 UBAP2Q5T6F2 1119 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ZNF518AQ6AHZ1 1483 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CHSY3Q70JA7 882 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GPAT4Q86UL3 456 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MEIOBQ8N635 442 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LINC00301Q8NCQ3 95 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 LINC00116Q8NCU8 138 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SPATA4Q8NEY3 305 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ACTRT2Q8TDY3 377 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 STRBPQ96SI9 672 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 FEM1AQ9BSK4 669 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 FBXO6Q9NRD1 293 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 TRMT13Q9NUP7 481 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SMG5Q9UPR3 1016 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ACOT9Q9Y305 439 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PCDHGA8Q9Y5G5 932 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GAKO14976 1311 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 C5orf51A6NDU8 294 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MEIS2O14770 477 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CDH16O75309 829 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MMP3P08254 477 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 IFNAR1P17181 557 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 RAB4AP20338 218 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 OR1D2P34982 312 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 KLK7P49862 253 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 RPL38P63173 70 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PURAQ00577 322 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 HSPB3Q12988 150 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 STK11Q15831 433 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ZIK1Q3SY52 487 aaPredicted RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ALG10BQ5I7T1 473 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 STYK1Q6J9G0 422 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 CRTC1Q6UUV9 634 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 MOB2Q70IA6 237 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SYVN1Q86TM6 617 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 KBTBD2Q8IY47 623 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 UNC5BQ8IZJ1 945 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 SPATA6LQ8N4H0 392 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 FAM46DQ8NEK8 389 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 BPIFB6Q8NFQ5 453 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 ETNPPLQ8TBG4 499 aa5.79□□□□□ -1.48
BRCA1-203ENST00000357654 GTPBP3Q969Y2 492 aaKnown RBP5.79□□□□□ -1.48
BRCA1-203ENST00000357654 PPCDCQ96CD2 204 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms