RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 TM6SF2Q9BZW4 377 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 CXorf21Q9HAI6 301 aa14.83□□□□□ -0.04
CHD4-201ENST00000357008 GBA2Q9HCG7 927 aaPredicted RBP14.83□□□□□ -0.04
CHD4-201ENST00000357008 AKIRIN2Q53H80 203 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ARL13AQ5H913 290 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 CBR4Q8N4T8 237 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 CCDC185Q8N715 623 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 EZH1Q92800 747 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 NEK6Q9HC98 313 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ST3GAL5Q9UNP4 418 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 DNAJA2O60884 412 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 GRM5P41594 1212 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 OMPP47874 163 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 LLGL2Q6P1M3 1020 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 XYLT1Q86Y38 959 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ARL10Q8N8L6 244 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 PPCDCQ96CD2 204 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 C1GALT1C1Q96EU7 318 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 TSPAN18Q96SJ8 248 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 SALL4Q9UJQ4 1053 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 PEX2P28328 305 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 RPL9P32969 192 aaKnown RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 FASTKD3Q14CZ7 662 aaKnown RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 LCLAT1Q6UWP7 414 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 SLC26A9Q7LBE3 791 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 DEFB128Q7Z7B8 93 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 TOP6BLQ8N6T0 577 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 OR4A15Q8NGL6 344 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 FCRL2Q96LA5 508 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 COPS8Q99627 209 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 RHBGQ9H310 441 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 SPATA31C2B4DYI2 1134 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 CCNE2O96020 404 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 PTPN5P54829 565 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 JAM2P57087 298 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 PDP1Q9P0J1 537 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 ADRA1BP35368 520 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 LIMK2P53671 638 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ENPEPQ07075 957 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 ELP6Q0PNE2 266 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 SIM2Q14190 667 aaPredicted RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 AP5B1Q2VPB7 878 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 COLGALT2Q8IYK4 626 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 NXNL1Q96CM4 212 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 CPXM1Q96SM3 734 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 CCDC59Q9P031 241 aaKnown RBP14.82□□□□□ -0.04
CHD4-201ENST00000357008 DGKBQ9Y6T7 804 aa14.82□□□□□ -0.04
CHD4-201ENST00000357008 LRCH4O75427 683 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 ANGPTL1O95841 491 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 MAPK9P45984 424 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 TRIM32Q13049 653 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 BTG3Q14201 252 aaPredicted RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 CATSPERGQ6ZRH7 1159 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 GRIN3AQ8TCU5 1115 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 TWIST2Q8WVJ9 160 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 NXF3Q9H4D5 531 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 COQ6Q9Y2Z9 468 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 PTGIRP43119 386 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 LIPEQ05469 1076 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 CPTPQ5TA50 214 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 BRD9Q9H8M2 597 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 TMPRSS4Q9NRS4 437 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 RASSF1Q9NS23 344 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 MCUBQ9NWR8 336 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 NDOR1Q9UHB4 597 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 PLIN3O60664 434 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 BUD31P41223 144 aaPredicted RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 VWA5B1Q5TIE3 1220 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 EEF1DP3Q658K8 133 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 FAM92BQ6ZTR7 304 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 GALNT5Q7Z7M9 940 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 IL31RAQ8NI17 732 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 PNPT1Q8TCS8 783 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 SUSD6Q92537 303 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 TTYH3Q9C0H2 523 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 C12orf65Q9H3J6 166 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 ELOVL7A1L3X0 281 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 PSIP1O75475 530 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 ZNF12P17014 697 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 UGCGQ16739 394 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 VPS26BQ4G0F5 336 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 REP15Q6BDI9 236 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 DENND1CQ8IV53 801 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 FGFBP2Q9BYJ0 223 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 FBXO10Q9UK96 956 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 GPC6Q9Y625 555 aaPredicted RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 ATRNO75882 1429 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 ARHGEF33A8MVX0 844 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 MTRF1O75570 445 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 PSMA1P25786 263 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 EPHX2P34913 555 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 NRG1Q02297 640 aaPredicted RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 AGMOQ6ZNB7 445 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 FAM35AQ86V20 835 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 TRPV1Q8NER1 839 aa14.81□□□□□ -0.04
CHD4-201ENST00000357008 CLP1Q92989 425 aaKnown RBP14.81□□□□□ -0.04
CHD4-201ENST00000357008 DERAQ9Y315 318 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms