RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 OSMRQ99650 979 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 GPATCH1Q9BRR8 931 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 C5orf51A6NDU8 294 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 TRUB2O95900 331 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 ECHS1P30084 290 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 TUBA4AP68366 448 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 TXNL4AP83876 142 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 PPP3CAQ08209 521 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 NAE1Q13564 534 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 EARS2Q5JPH6 523 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 THAP5Q7Z6K1 395 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 HM13Q8TCT9 377 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 NEUROD4Q9HD90 331 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 MATN2O00339 956 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 ULK1O75385 1050 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 FTH1P02794 183 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 CD40LGP29965 261 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 AP3S2P59780 193 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 CSTF1Q05048 431 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM183BPQ6ZVS7 135 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 FITM2Q8N6M3 262 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 ASB12Q8WXK4 309 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 SUCOQ9UBS9 1254 aaKnown RBP11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 TMEM5Q9Y2B1 443 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM205AQ6ZU69 1335 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 NEXMIFQ5QGS0 1516 aa11.02□□□□□ -0.65
GTF3C1-201ENST00000356183 CPSF4LA6NMK7 179 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ZW10O43264 779 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FABP3P05413 133 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PTGES3Q15185 160 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SEC23AQ15436 765 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 LY6KQ17RY6 165 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SLC39A12Q504Y0 691 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ARCQ7LC44 396 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 NKAPQ8N5F7 415 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 OR2T34Q8NGX1 318 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 OR2T3Q8NH03 318 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 DNAJA4Q8WW22 397 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FBXO44Q9H4M3 255 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 MAGEL2Q9UJ55 1249 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 GRIN2DO15399 1336 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM149AA5PLN7 773 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FPGTO14772 594 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 AIREO43918 545 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ERAL1O75616 437 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SERPINB7O75635 380 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PPM1BO75688 479 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 CSN2P05814 226 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 CTBP1Q13363 440 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 DLG2Q15700 870 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PLA2G4EQ3MJ16 856 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ITIH5Q86UX2 942 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 RASAL3Q86YV0 1011 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 LINGO1Q96FE5 620 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 LMAN2LQ9H0V9 348 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ALG2Q9H553 416 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PCDHB5Q9Y5E4 795 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 BDNFP23560 247 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ANXA8L1Q5VT79 327 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 HDAC2Q92769 488 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 RERGQ96A58 199 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FEM1CQ96JP0 617 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 MGME1Q9BQP7 344 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 MED11Q9P086 117 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PHF24Q9UPV7 400 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 KPNA3O00505 521 aaPredicted RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SLC30A4O14863 429 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SCGB1D2O95969 90 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ITGA2BP08514 1039 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 CLCN5P51795 746 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 MANFP55145 182 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ZNF280DQ6N043 979 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 TXNDC11Q6PKC3 985 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PHC3Q8NDX5 983 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 KAZALD1Q96I82 304 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 TUBGCP5Q96RT8 1024 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 UPB1Q9UBR1 384 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FKBP7Q9Y680 259 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FABP12A6NFH5 140 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 DCLK1O15075 740 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM155BO75949 473 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PITRM1Q5JRX3 1037 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 FAM91A1Q658Y4 838 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 GLYATQ6IB77 296 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 ANKRD26P1Q6NSI1 321 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SLC30A6Q6NXT4 461 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 GPR180Q86V85 440 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 NETO2Q8NC67 525 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PPCDCQ96CD2 204 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 MTIF3Q9H2K0 278 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 PSME2Q9UL46 239 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 SAMD4AQ9UPU9 718 aaKnown RBP11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 A0A0A0MRY4 1105 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 TMEM150BA6NC51 233 aa11.01□□□□□ -0.65
GTF3C1-201ENST00000356183 KCNU1A8MYU2 1149 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms