RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 IPMKQ8NFU5 416 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 RNF139Q8WU17 664 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 C19orf60Q96EN9 201 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 CNDP2Q96KP4 475 aaKnown RBP7.63□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM39BQ9GZU3 492 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 AKTIPQ9H8T0 292 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 BOLA1Q9Y3E2 137 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PCDHGA8Q9Y5G5 932 aa7.63□□□□□ -1.19
BRCA1-201ENST00000352993 PSME4Q14997 1843 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LACTBL1A8MY62 500 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 GSTA4O15217 222 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SOAT2O75908 522 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 JCHAINP01591 159 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 APOA1P02647 267 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLC4A1P02730 911 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PTPN2P17706 415 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 CAPN3P20807 821 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 CD40LGP29965 261 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 AXLP30530 894 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ALDH7A1P49419 539 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 EFNA5P52803 228 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 YBX1P67809 324 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ADARB1P78563 741 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TNFAIP2Q03169 654 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 CHRNB3Q05901 458 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 DAG1Q14118 895 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 RBM48Q5RL73 367 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TSTD2Q5T7W7 516 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF470Q6ECI4 717 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 GTF2IRD2BQ6EKJ0 949 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LCN8Q6JVE9 175 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SPESP1Q6UW49 350 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ABHD15Q6UXT9 468 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLC26A9Q7LBE3 791 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM135Q86UB9 458 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 GTF2IRD2Q86UP8 949 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 FUNDC1Q8IVP5 155 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PNPLA1Q8N8W4 532 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 FBXO30Q8TB52 745 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 NSUN6Q8TEA1 469 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLC22A17Q8WUG5 538 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ATL1Q8WXF7 558 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PROX1Q92786 737 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 BIRC7Q96CA5 298 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MAELQ96JY0 434 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLC30A3Q99726 388 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 C1QTNF1Q9BXJ1 281 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM134Q9H6X4 195 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PLEKHA5Q9HAU0 1116 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MAGEE1Q9HCI5 957 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MID1IP1Q9NPA3 183 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 C8orf4Q9NR00 106 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SIX4Q9UIU6 781 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ZNF221Q9UK13 617 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SARDHQ9UL12 918 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SATB2Q9UPW6 733 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 A0A087WZ62 844 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 YDJCA8MPS7 323 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 M0QX08 132 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 KPNA6O60684 536 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 IPO13O94829 963 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 AP2A1O95782 977 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LINC00032P0C843 101 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 HGFP14210 728 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 JUNBP17275 347 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 POLR2EP19388 210 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLC6A2P23975 617 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MTHFRP42898 656 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MAP2K4P45985 399 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 RACK1P63244 317 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 CATSPEREQ5SY80 951 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 STRIP1Q5VSL9 837 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 DESI1Q6ICB0 168 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TRAF7Q6Q0C0 670 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MPZL3Q6UWV2 235 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 RFPL4BQ6ZWI9 263 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 P2RY8Q86VZ1 359 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 TMEM151AQ8N4L1 468 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ZHX1-C8orf76Q96EF9 292 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 PDGFDQ9GZP0 370 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ALG9Q9H6U8 611 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MEAF6Q9HAF1 191 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 EVLQ9UI08 416 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 SLCO3A1Q9UIG8 710 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 UGT2A1Q9Y4X1 527 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ANGPTL3Q9Y5C1 460 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 MRPL42Q9Y6G3 142 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ZSCAN5BA6NJL1 495 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 A8MT66 165 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 G3V2T6 193 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 H0YAE9 185 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 C7P10643 843 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 DBTP11182 482 aaKnown RBP7.62□□□□□ -1.19
BRCA1-201ENST00000352993 IL12AP29459 219 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 LAPTM5Q13571 262 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 ADPRMQ3LIE5 342 aa7.62□□□□□ -1.19
BRCA1-201ENST00000352993 CCDC58Q4VC31 144 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms