RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 KCTD4Q8WVF5 259 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 YIPF6Q96EC8 236 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ZHX1-C8orf76Q96EF9 292 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ASB2Q96Q27 587 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 BDH2Q9BUT1 245 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 SEPT9Q9UHD8 586 aaPredicted RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 SNX6Q9UNH7 406 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 TCP10L2B9ZVM9 353 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 SLC1A7O00341 560 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 POLRMTO00411 1230 aaKnown RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 NR5A2O00482 541 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CTDSP2O14595 271 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 EXTL3O43909 919 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 HSD17B1P14061 328 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CD19P15391 556 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ATF4P18848 351 aaPredicted RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 PIGAP37287 484 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 AVPR1AP37288 418 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 TARDBPQ13148 414 aaKnown RBP eCLIP13.23□□□□□ -0.29
IFT88-202ENST00000351808 SNTA1Q13424 505 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 DAG1Q14118 895 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 MFSD14BQ5SR56 506 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 ERAP2Q6P179 960 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 NOXA1Q86UR1 476 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 XYLT1Q86Y38 959 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 FSTL5Q8N475 847 aaPredicted RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 SPATA6LQ8N4H0 392 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 PARP16Q8N5Y8 322 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 RAVER2Q9HCJ3 691 aaKnown RBP13.23□□□□□ -0.29
IFT88-202ENST00000351808 TNFRSF12AQ9NP84 129 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 CISHQ9NSE2 258 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 FAM118AQ9NWS6 357 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 OSGIN1Q9UJX0 560 aa13.23□□□□□ -0.29
IFT88-202ENST00000351808 MN1Q10571 1320 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 CCNE2O96020 404 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ALPLP05186 524 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 POLBP06746 335 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TGM2P21980 687 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 CDH5P33151 784 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 MLLT3P42568 568 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 OLIG2Q13516 323 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ZNF404Q494X3 552 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 VPS26BQ4G0F5 336 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ILDR2Q71H61 639 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 RPS27LQ71UM5 84 aaKnown RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 CLYBLQ8N0X4 340 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 APPL2Q8NEU8 664 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 LILRB1Q8NHL6 650 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 ROPN1LQ96C74 230 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 UBXN10Q96LJ8 280 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 FYTTD1Q96QD9 318 aaKnown RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 SMURF2Q9HAU4 748 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 NTN4Q9HB63 628 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ASNSD1Q9NWL6 643 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ABCD2Q9UBJ2 740 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TLK1Q9UKI8 766 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 TCRBV5S2A0A599 114 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 H0Y626 953 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 PRPSAP2O60256 369 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 APOA4P06727 396 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 YES1P07947 543 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ANKRD34AQ69YU3 496 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 KIAA1841Q6NSI8 718 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 FAM122CQ6P4D5 195 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ZBTB33Q86T24 672 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TMBIM1Q969X1 311 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ZNF669Q96BR6 464 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 BEX2Q9BXY8 128 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TAS2R9Q9NYW1 312 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 SRP68Q9UHB9 627 aaKnown RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 DAGLAQ9Y4D2 1042 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ATP6V1G2-DDX39BF2Z307 99 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 EPN2O95208 641 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 MYCP01106 439 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 PCNAP12004 261 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 SLC6A2P23975 617 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 ATICP31939 592 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 DEFA1P59665 94 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 DEFA3P59666 94 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 CA9Q16790 459 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 SEZ6Q53EL9 994 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TTC23Q5W5X9 447 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 BEND5Q7L4P6 421 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 PRSS48Q7RTY5 328 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 CDKL3Q8IVW4 592 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 TCAIMQ8N3R3 496 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 TSNARE1Q96NA8 513 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 NEDD4LQ96PU5 975 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 C1QTNF7Q9BXJ2 289 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 FAM49AQ9H0Q0 323 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 DCSTAMPQ9H295 470 aa13.22□□□□□ -0.29
IFT88-202ENST00000351808 RANGRFQ9HD47 186 aaPredicted RBP13.22□□□□□ -0.29
IFT88-202ENST00000351808 ERVK-18Q9QC07 812 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms