RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 DCDC1P59894 354 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 PDE1BQ01064 536 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 DR1Q01658 176 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 PDE1CQ14123 709 aaPredicted RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 DHX34Q14147 1143 aaKnown RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 KCNJ11Q14654 390 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 WHAMMP3Q1A5X7 153 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 HLA-BQ31612 363 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 ZDHHC20Q5W0Z9 365 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 RAET1GQ6H3X3 334 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 KDM7AQ6ZMT4 941 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 ZNF572Q7Z3I7 529 aaPredicted RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 SPATS2Q86XZ4 545 aaKnown RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 SLC22A18ASQ8N1D0 253 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 PELI3Q8N2H9 469 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 KRT12Q99456 494 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 APOOQ9BUR5 198 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 RIOK2Q9BVS4 552 aaKnown RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 GTPBP2Q9BX10 602 aaKnown RBP13.9□□□□□ -0.19
SEC13-202ENST00000350697 GAREM1Q9H706 876 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 WDR26Q9H7D7 661 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 ERVMER34-1Q9H9K5 563 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 CASS4Q9NQ75 786 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.9□□□□□ -0.194e-32■■■■□ 25.9
SEC13-202ENST00000350697 IL17CQ9P0M4 197 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 ASIC3Q9UHC3 531 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 PKP3Q9Y446 797 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 OR1A2Q9Y585 309 aa13.9□□□□□ -0.19
SEC13-202ENST00000350697 SCN8AQ9UQD0 1980 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 AP3B1O00203 1094 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 STX7O15400 261 aaKnown RBP13.89□□□□□ -0.19
SEC13-202ENST00000350697 DFNA5O60443 496 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 HOXC4P09017 264 aaPredicted RBP13.89□□□□□ -0.19
SEC13-202ENST00000350697 TPH1P17752 444 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 HTR1BP28222 390 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 GRIA1P42261 906 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 GPR1P46091 355 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 SARNPP82979 210 aaKnown RBP13.89□□□□□ -0.19
SEC13-202ENST00000350697 PTK2BQ14289 1009 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 ZNF423Q2M1K9 1284 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
SEC13-202ENST00000350697 ADAMTSL4Q6UY14 1074 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 JAMLQ86YT9 394 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 OXR1Q8N573 874 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 MINDY1Q8N5J2 469 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 GPR26Q8NDV2 337 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 MYRIPQ8NFW9 859 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 CPT1BQ92523 772 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 PLEKHG4BQ96PX9 1271 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 C19orf43Q9BQ61 176 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 TEX101Q9BY14 249 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 BPIFA1Q9NP55 256 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 TMEM9BQ9NQ34 198 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 RXFP3Q9NSD7 469 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 PIH1D1Q9NWS0 290 aaKnown RBP13.89□□□□□ -0.19
SEC13-202ENST00000350697 ARL5AQ9Y689 179 aa13.89□□□□□ -0.19
SEC13-202ENST00000350697 TMEM131Q92545 1883 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 CEP250Q9BV73 2442 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 CACNB4O00305 520 aaPredicted RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 CDX4O14627 284 aaPredicted RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 TTI1O43156 1089 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 BUD23O43709 281 aaKnown RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 ADCY8P40145 1251 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 ARRB1P49407 418 aaPredicted RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 KIAA1024LP59773 190 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 C2orf54Q08AI8 447 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 FZD2Q14332 565 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 POU6F1Q14863 301 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 NFATC4Q14934 902 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 TPRG1LQ5T0D9 272 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 MACC1Q6ZN28 852 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 PARGQ86W56 976 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 FUBP1Q96AE4 644 aaKnown RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 ELF4Q99607 663 aaPredicted RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 ZSCAN5AQ9BUG6 496 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 SPATA16Q9BXB7 569 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 PHPT1Q9NRX4 125 aaPredicted RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 DNAAF2Q9NVR5 837 aaKnown RBP13.88□□□□□ -0.19
SEC13-202ENST00000350697 MRFAP1Q9Y605 127 aa13.88□□□□□ -0.19
SEC13-202ENST00000350697 TCRBV7S3A2A0A539 114 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 LDB2O43679 373 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 GDF9O60383 454 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 SOD1P00441 154 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 MYCLP1P12525 358 aaPredicted RBP13.87□□□□□ -0.19
SEC13-202ENST00000350697 KELP23276 732 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 SPAM1P38567 509 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 ZNF140P52738 457 aaPredicted RBP13.87□□□□□ -0.19
SEC13-202ENST00000350697 ARHGAP8P85298 464 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 CDK3Q00526 305 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 LAMB3Q13751 1172 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 SEPT6Q14141 434 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 CERCAMQ5T4B2 595 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 ANKRD22Q5VYY1 191 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 ALS2CLQ60I27 953 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 PDPK2PQ6A1A2 396 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 LRRC8BQ6P9F7 803 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 MAATS1Q7Z4T9 603 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 HEATR4Q86WZ0 1026 aa13.87□□□□□ -0.19
SEC13-202ENST00000350697 PPIL6Q8IXY8 311 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms