RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 GABPB2Q8TAK5 448 aaPredicted RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 ROPN1LQ96C74 230 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 HSFY1Q96LI6 401 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 WDR12Q9GZL7 423 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 RHOJQ9H4E5 214 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 SCUBE2Q9NQ36 999 aa18.64■□□□□ 0.57
SCARF1-202ENST00000348987 UBQLN1Q9UMX0 589 aaKnown RBP18.64■□□□□ 0.57
SCARF1-202ENST00000348987 CCL15-CCL14A0A0B4J2E2 113 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 NR5A2O00482 541 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 ABCB7O75027 752 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 AP2A1O95782 977 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CHRM3P20309 590 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 RFC2P35250 354 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 PIGFQ07326 219 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 TRIM32Q13049 653 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CAMK2BQ13554 666 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 POLD3Q15054 466 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CCL15Q16663 113 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 LCN8Q6JVE9 175 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 PDZD8Q8NEN9 1154 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 BRI3BPQ8WY22 251 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 MRPL46Q9H2W6 279 aaKnown RBP18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CMTM6Q9NX76 183 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 ACTR3BQ9P1U1 418 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 V9GYQ6 96 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 TTC24A2A3L6 582 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-202ENST00000348987 H0Y858 1186 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 FYNP06241 537 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 GFAPP14136 432 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 KCNA5P22460 613 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 HADHAP40939 763 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 ARCN1P48444 511 aaKnown RBP18.63■□□□□ 0.57
SCARF1-202ENST00000348987 PLK1P53350 603 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CLCQ05315 142 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 LDLRAD1Q5T700 205 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 KIAA0319Q5VV43 1072 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CLEC6AQ6EIG7 209 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 SLC16A12Q6ZSM3 486 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 USP50Q70EL3 339 aaPredicted RBP18.63■□□□□ 0.57
SCARF1-202ENST00000348987 CUZD1Q86UP6 607 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 ITIH5Q86UX2 942 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 MFSD6LQ8IWD5 586 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 NPY6RQ99463 290 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 TLR9Q9NR96 1032 aa18.63■□□□□ 0.57
SCARF1-202ENST00000348987 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 ALBP02768 609 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 UGT2B4P06133 528 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 NCK1P16333 377 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 HTR1BP28222 390 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 ACADSBP45954 432 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 LILRA4P59901 499 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 CTBP1Q13363 440 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 MAPK11Q15759 364 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 PLEKHG7Q6ZR37 379 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 R3HCC1LQ7Z5L2 792 aaKnown RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 SLCO6A1Q86UG4 719 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 DENND6AQ8IWF6 608 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 SPARTQ8N0X7 666 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 NPWQ8N729 165 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 MINDY2Q8NBR6 621 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 OR6J1Q8NGC5 347 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 CAPSLQ8WWF8 208 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 NT5C3BQ969T7 300 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 MS4A4AQ96JQ5 239 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 IL12RB2Q99665 862 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 CASS4Q9NQ75 786 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 MRGBPQ9NV56 204 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 ABCD2Q9UBJ2 740 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 IFT52Q9Y366 437 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 SNX10Q9Y5X0 201 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 NUP205Q92621 2012 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 A0A0J9YYE9 177 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 AXIN1O15169 862 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 EIF2S1P05198 315 aaKnown RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 DARSP14868 501 aaKnown RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 SCNN1AP37088 669 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 NEK2P51955 445 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 HNRNPFP52597 415 aaKnown RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 IFITM2Q01629 132 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 FRG1Q14331 258 aaKnown RBP18.62■□□□□ 0.57
SCARF1-202ENST00000348987 ZNF280DQ6N043 979 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 SLC22A16Q86VW1 577 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 HEXDCQ8WVB3 486 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 DNAJB3Q8WWF6 145 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 RHOBTB2Q9BYZ6 727 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 TMEM30AQ9NV96 361 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 GDAP2Q9NXN4 497 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 UBP1Q9NZI7 540 aa18.62■□□□□ 0.57
SCARF1-202ENST00000348987 EEF2KO00418 725 aaKnown RBP18.61■□□□□ 0.57
SCARF1-202ENST00000348987 AURKAO14965 403 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 ALDOCP09972 364 aaKnown RBP18.61■□□□□ 0.57
SCARF1-202ENST00000348987 IL7RP16871 459 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 PTPN2P17706 415 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 ERCC2P18074 760 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 TSPAN8P19075 237 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 PTPN3P26045 913 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 MAP3K7CLP57077 242 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 RAB10P61026 200 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 NDUFA5Q16718 116 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 KIF19Q2TAC6 998 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms