RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 NELFEP18615 380 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 CDH2P19022 906 aaPredicted RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 YBEYP58557 167 aaPredicted RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 ZXDBP98169 803 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 IL31Q6EBC2 164 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 C16orf59Q7L2K0 433 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 LDB1Q86U70 411 aaPredicted RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 CCDC117Q8IWD4 279 aaPredicted RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 LSMEM2Q8N112 164 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 PCDH20Q8N6Y1 951 aaKnown RBP21.29■■□□□ 1
PTPN18-202ENST00000347849 TRIML2Q8N7C3 387 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 EXOC2Q96KP1 924 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 MYRFLQ96LU7 910 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 C1QTNF1Q9BXJ1 281 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 SLC2A11Q9BYW1 496 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 COQ10BQ9H8M1 238 aa21.29■■□□□ 1
PTPN18-202ENST00000347849 OR51F1A6NGY5 319 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 CAPNS1P04632 268 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 SLC35E2BP0CK96 405 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 SLC11A2P49281 568 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 PTK2BQ14289 1009 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 C1orf53Q5VUE5 145 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 CNSTQ6PJW8 725 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 DNAJB7Q7Z6W7 309 aaPredicted RBP21.28■■□□□ 1
PTPN18-202ENST00000347849 PDZD8Q8NEN9 1154 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 TSPAN14Q8NG11 270 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 KCTD4Q8WVF5 259 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 TSNARE1Q96NA8 513 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 PCDHAC1Q9H158 963 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 ZNF334Q9HCZ1 680 aaPredicted RBP21.28■■□□□ 1
PTPN18-202ENST00000347849 TIMMDC1Q9NPL8 285 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 VPS45Q9NRW7 570 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 MID2Q9UJV3 735 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 A0A0J9YVX5 310 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 TMEM233B4DJY2 109 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 SLC22A2O15244 555 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 WDR5P61964 334 aaKnown RBP21.28■■□□□ 1
PTPN18-202ENST00000347849 TNK2Q07912 1038 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 GALNT3Q14435 633 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 CCNYL1Q8N7R7 359 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 TTC16Q8NEE8 873 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 GRIN3AQ8TCU5 1115 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 TMIGD2Q96BF3 282 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 PPP1R2P1Q96PQ5 205 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 CCT7Q99832 543 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 MRM3Q9HC36 420 aaKnown RBP21.28■■□□□ 1
PTPN18-202ENST00000347849 EPS15L1Q9UBC2 864 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 VTI1BQ9UEU0 232 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 RNF11Q9Y3C5 154 aa21.28■■□□□ 1
PTPN18-202ENST00000347849 LOC285095A0A1B0GVY8 99 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 PRRG1O14668 218 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 APOA4P06727 396 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 ADSLP30566 484 aaPredicted RBP21.27■■□□□ 1
PTPN18-202ENST00000347849 NSUN2Q08J23 767 aaKnown RBP eCLIP21.27■■□□□ 1
PTPN18-202ENST00000347849 TAF12Q16514 161 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 TSTD2Q5T7W7 516 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 KIAA0930Q6ICG6 404 aaPredicted RBP21.27■■□□□ 1
PTPN18-202ENST00000347849 NEPROQ6NW34 567 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 BORAQ6PGQ7 559 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 FSTL5Q8N475 847 aaPredicted RBP21.27■■□□□ 1
PTPN18-202ENST00000347849 PTCD2Q8WV60 388 aaKnown RBP21.27■■□□□ 1
PTPN18-202ENST00000347849 GAB3Q8WWW8 586 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 SMIM14Q96QK8 99 aa21.27■■□□□ 1
PTPN18-202ENST00000347849 SUDS3Q9H7L9 328 aaPredicted RBP21.27■■□□□ 1
PTPN18-202ENST00000347849 CLCN2P51788 898 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 ADARP55265 1226 aaKnown RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 ZNF235Q14590 738 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 EML3Q32P44 896 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 RBM20Q5T481 1227 aaKnown RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 CENPLQ8N0S6 344 aaPredicted RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 C2CD4AQ8NCU7 369 aaPredicted RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 LRTOMTQ8WZ04 291 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 OMDQ99983 421 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 KLF16Q9BXK1 252 aaPredicted RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 POLR1EQ9GZS1 481 aaKnown RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 LIN28AQ9H9Z2 209 aaKnown RBP21.27■□□□□ 0.99
PTPN18-202ENST00000347849 FBXO5Q9UKT4 447 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 AP4S1Q9Y587 144 aa21.27■□□□□ 0.99
PTPN18-202ENST00000347849 FAM95CA0A1B0GW59 222 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 GALK1P51570 392 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 HERC3Q15034 1050 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 TPGS2Q68CL5 300 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 GK5Q6ZS86 529 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 OVCA2Q8WZ82 227 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 FAM210AQ96ND0 272 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 CDK5RAP1Q96SZ6 601 aaKnown RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 CHCHD3Q9NX63 227 aaKnown RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 THEGQ9P2T0 379 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 MTF2Q9Y483 593 aaPredicted RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 HEMK1Q9Y5R4 338 aaPredicted RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 KIAA0100Q14667 2235 aaKnown RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 ABHD14A-ACY1A0A1B0GW23 586 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 HEATR9A2RTY3 570 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 SLCO1B7G3V0H7 640 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 TRIM38O00635 465 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 NRG2O14511 850 aaPredicted RBP21.26■□□□□ 0.99
PTPN18-202ENST00000347849 DLX3O60479 287 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 CDH4P55283 916 aa21.26■□□□□ 0.99
PTPN18-202ENST00000347849 TAS2R39P59534 338 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms