RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 SLC15A3Q8IY34 581 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 GABPB2Q8TAK5 448 aaPredicted RBP15.87■□□□□ 0.13
HMGA1-202ENST00000347617 SLC2A14Q8TDB8 520 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 OSCP1Q8WVF1 389 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 CYGBQ8WWM9 190 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 MFSD3Q96ES6 412 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 PPP1R2P1Q96PQ5 205 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 SLC9A7Q96T83 725 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 CGREF1Q99674 301 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 HMG20AQ9NP66 347 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 CCDC167Q9P0B6 97 aa15.87■□□□□ 0.13
HMGA1-202ENST00000347617 TYW5A2RUC4 315 aaKnown RBP15.86■□□□□ 0.13
HMGA1-202ENST00000347617 C16orf96A6NNT2 1141 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 EEF2KO00418 725 aaKnown RBP15.86■□□□□ 0.13
HMGA1-202ENST00000347617 PITPNM1O00562 1244 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 DCLK1O15075 740 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 PHGDHO43175 533 aaKnown RBP15.86■□□□□ 0.13
HMGA1-202ENST00000347617 GABBR2O75899 941 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 PARNO95453 639 aaKnown RBP15.86■□□□□ 0.13
HMGA1-202ENST00000347617 RBP1P09455 135 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 GNAO1P09471 354 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 NPR3P17342 541 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 POU4F1Q01851 419 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 MBTPS1Q14703 1052 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 OXA1LQ15070 435 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 TSTD2Q5T7W7 516 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 GLB1LQ6UWU2 654 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 LRRC8DQ7L1W4 858 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 METTL23Q86XA0 190 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 SLC15A4Q8N697 577 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 TANKQ92844 425 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 ASB2Q96Q27 587 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 ACBD6Q9BR61 282 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 RAD21L1Q9H4I0 556 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 KIAA1522Q9P206 1035 aaPredicted RBP15.86■□□□□ 0.13
HMGA1-202ENST00000347617 ZNF639Q9UID6 485 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 OGDHLQ9ULD0 1010 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 DOLKQ9UPQ8 538 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 MFHAS1Q9Y4C4 1052 aa15.86■□□□□ 0.13
HMGA1-202ENST00000347617 FAM95CA0A1B0GW59 222 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CLDN25C9JDP6 229 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TMEM189-UBE2V1I3L0A0 370 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TYMPP19971 482 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 RPS9P46781 194 aaKnown RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 GLRBP48167 497 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 EIF2B2P49770 351 aaKnown RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 SULT1E1P49888 294 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ADARB1P78563 741 aaKnown RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ZNF33AQ06730 810 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CBX2Q14781 532 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 NDUFA5Q16718 116 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 FAM83EQ2M2I3 478 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 AASDHQ4L235 1098 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TIGD5Q53EQ6 642 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 PCID2Q5JVF3 399 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CNSTQ6PJW8 725 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 PAQR9Q6ZVX9 377 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 SLC41A1Q8IVJ1 513 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 FAM126BQ8IXS8 530 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ADGRG5Q8IZF4 528 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TXNDC5Q8NBS9 432 aaKnown RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 IFT80Q9P2H3 777 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 STAP1Q9ULZ2 295 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 MAGED2Q9UNF1 606 aaPredicted RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ZNF638Q14966 1978 aaKnown RBP15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ACOX3O15254 700 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ABCB7O75027 752 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 GFAPP14136 432 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 ADORA2BP29275 332 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 NOS2P35228 1153 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 RFC2P35250 354 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 SLC12A2P55011 1212 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TNK2Q07912 1038 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CERCAMQ5T4B2 595 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 AGAP9Q5VTM2 703 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CD300LGQ6UXG3 332 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 BNIPLQ7Z465 357 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CUZD1Q86UP6 607 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 DDIASQ8IXT1 998 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 C3orf58Q8NDZ4 430 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 C17orf50Q8WW18 174 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 NXNL1Q96CM4 212 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 HDAC11Q96DB2 347 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TSPAN17Q96FV3 270 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 SUSD3Q96L08 255 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 RDH12Q96NR8 316 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 TMEM161AQ9NX61 479 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 AURKCQ9UQB9 309 aa15.85■□□□□ 0.13
HMGA1-202ENST00000347617 CCDC78A2IDD5 438 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 TMEM233B4DJY2 109 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 B3GAT3O94766 335 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 IPO13O94829 963 aaKnown RBP15.84■□□□□ 0.13
HMGA1-202ENST00000347617 SEC24DO94855 1032 aaPredicted RBP15.84■□□□□ 0.13
HMGA1-202ENST00000347617 POMCP01189 267 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 PAMP19021 973 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 CD247P20963 164 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 ABCG1P45844 678 aa15.84■□□□□ 0.13
HMGA1-202ENST00000347617 ATXN1P54253 815 aaKnown RBP15.84■□□□□ 0.13
HMGA1-202ENST00000347617 GABARAPL2P60520 117 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms