RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 SPDYCQ5MJ68 293 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM151BQ6UXP7 276 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 PELI3Q8N2H9 469 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 CAMKK1Q8N5S9 505 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 OR6P1Q8NGX9 317 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 SCAMP4Q969E2 229 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 AGAP2Q99490 1192 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 ABCG8Q9H221 673 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A7Q9HAW7 530 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A10Q9HAW8 530 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A8Q9HAW9 530 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF446Q9NWS9 450 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 PKD2L2Q9NZM6 624 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 INVSQ9Y283 1065 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 HCN4Q9Y3Q4 1203 aa18.94■□□□□ 0.62
CHMP4A-201ENST00000347519 A0A087WUV0 522 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 IGHV1OR15-9A0A0B4J2B8 117 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 A0A1W2PQU0 124 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM86C2PA6NEL3 165 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 FAM159BA6NKW6 160 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PRR33A8MZF0 331 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 C10orf142B7Z368 130 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 H7C0S8 307 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PSMD11O00231 422 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 DYNC1I1O14576 645 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 LZTS3O60299 673 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 SPAG6O75602 509 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 RECQL5O94762 991 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TDGF1P13385 188 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 MC4RP32245 332 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PRAMEP78395 509 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 CREB5Q02930 508 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 CASP8Q14790 479 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 CHRNA6Q15825 494 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 MAP7D1Q3KQU3 841 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 KBTBD12Q3ZCT8 623 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PTAR1Q7Z6K3 402 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 KCNMB4Q86W47 210 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 MAML2Q8IZL2 1156 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 DTD2Q96FN9 168 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 BTBD1Q9H0C5 482 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 C11orf16Q9NQ32 467 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 IARS2Q9NSE4 1012 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 NFS1Q9Y697 457 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PLXND1Q9Y4D7 1925 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3DA0A087WVF3 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3IA0A087WXS9 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3EA0A087X179 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3KA0A087X1G2 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3FA6NER0 549 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3LB9A6J9 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 WNT9AO14904 365 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3HP0C7X1 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PAMP19021 973 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A6P19224 532 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A1P22309 533 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A4P22310 534 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 FOXN2P32314 431 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PHBP35232 272 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A3P35503 534 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 UGT1A5P35504 534 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 SPAM1P38567 509 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 HADHAP40939 763 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 MGAT5Q09328 741 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 SFSWAPQ12872 951 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TMEM259Q4ZIN3 620 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TEDDM1Q5T9Z0 273 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3GQ6DHY5 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3CQ6IPX1 549 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 CYS1Q717R9 158 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 LDB1Q86U70 411 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PIANPQ8IYJ0 282 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TBC1D3Q8IZP1 549 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 IQCKQ8N0W5 287 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TOE1Q96GM8 510 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 C19orf43Q9BQ61 176 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 RIOK2Q9BVS4 552 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 ACSS3Q9H6R3 686 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 SGK2Q9HBY8 427 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PREBQ9HCU5 417 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PPANQ9NQ55 473 aaKnown RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PRMT8Q9NR22 394 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 WSB2Q9NYS7 404 aaPredicted RBP18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 TMPRSS11EQ9UL52 423 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 PLAAQ9Y263 795 aa18.93■□□□□ 0.62
CHMP4A-201ENST00000347519 SEMA4FO95754 770 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 NUDT17P0C025 328 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 GCAP28676 217 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 MAT2AP31153 395 aaKnown RBP18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 STX2P32856 288 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 ZNF284Q2VY69 593 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 PDPK2PQ6A1A2 396 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 PSAPL1Q6NUJ1 521 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 NEPROQ6NW34 567 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 AFTPHQ6ULP2 937 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 KDM7AQ6ZMT4 941 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 CYP2U1Q7Z449 544 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 HORMAD1Q86X24 394 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 DENND6AQ8IWF6 608 aa18.92■□□□□ 0.62
CHMP4A-201ENST00000347519 OR2T34Q8NGX1 318 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms