RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 TLR9Q9NR96 1032 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 HAUS2Q9NVX0 235 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MARCH4Q9P2E8 410 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LSM7Q9UK45 103 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SPO11Q9Y5K1 396 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 RAI2Q9Y5P3 530 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 IRAK3Q9Y616 596 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 NUMBLQ9Y6R0 609 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CAPN7Q9Y6W3 813 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 GBF1Q92538 1859 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TYW5A2RUC4 315 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LINC01553A4QN01 128 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 K7ERQ8 282 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ITM2AO43736 263 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LYPLA1O75608 230 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 FSBPO95073 299 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 IL1BP01584 269 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SLC35E2BP0CK96 405 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 HADHAP40939 763 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ST13P50502 369 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 TAS2R39P59534 338 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 STX3Q13277 289 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CAMK1Q14012 370 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PTPRRQ15256 657 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ATXN7L2Q5T6C5 722 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ZNF783Q6ZMS7 281 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ATG14Q6ZNE5 492 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 NLRP9Q7RTR0 991 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MFN1Q8IWA4 741 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SPATA6LQ8N4H0 392 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 PPP1R14CQ8TAE6 165 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 RIN3Q8TB24 985 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 ELMO2Q96JJ3 720 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 GCNAQ96QF7 691 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 UNKQ9C0B0 810 aaKnown RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MFSD1Q9H3U5 465 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MAN1C1Q9NR34 630 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 BATF3Q9NR55 127 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 COPG2Q9UBF2 871 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LHX3Q9UBR4 397 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 MARCOQ9UEW3 520 aaPredicted RBP9.25□□□□□ -0.93
ATG4A-202ENST00000345734 VPS51Q9UID3 782 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 SLC12A4Q9UP95 1085 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 LZTS1Q9Y250 596 aa9.25□□□□□ -0.93
ATG4A-202ENST00000345734 CCDC162PA2VCL2 907 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 CDC14CA4D256 554 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 G3V2L1 256 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 GRM6O15303 877 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 SLC7A4O43246 635 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 MOSPD3O75425 235 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TGDSO95455 350 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 GSTA1P08263 222 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 DLDP09622 509 aaKnown RBP9.24□□□□□ -0.93
ATG4A-202ENST00000345734 KITP10721 976 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 EPCAMP16422 314 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 GLRBP48167 497 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 CCNHP51946 323 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-202ENST00000345734 PRAMEP78395 509 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TRAF2Q12933 501 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TEAD2Q15562 447 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 CCDC153Q494R4 210 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 GPR158Q5T848 1215 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 ARMC3Q5W041 872 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 CILP2Q8IUL8 1156 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 CENPLQ8N0S6 344 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-202ENST00000345734 LPCAT1Q8NF37 534 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 BRSK1Q8TDC3 778 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 KCTD4Q8WVF5 259 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 RMDN1Q96DB5 314 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 ERP27Q96DN0 273 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 C7orf26Q96N11 449 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 NUDCD1Q96RS6 583 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TMEM120AQ9BXJ8 343 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TDRD1Q9BXT4 1180 aaKnown RBP9.24□□□□□ -0.93
ATG4A-202ENST00000345734 MCOLN1Q9GZU1 580 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 ACTR5Q9H9F9 607 aaPredicted RBP9.24□□□□□ -0.93
ATG4A-202ENST00000345734 NMRAL1Q9HBL8 299 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 TLK1Q9UKI8 766 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 MYO9BQ13459 2157 aa9.24□□□□□ -0.93
ATG4A-202ENST00000345734 A0A0U1RQS6 177 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 GRXCR1A8MXD5 290 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SMAD6O43541 496 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 GOT2P00505 430 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SLC4A1P02730 911 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CELA3AP09093 270 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 PRSS56P0CW18 603 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CPA3P15088 417 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 STMN1P16949 149 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ARRB2P32121 409 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 SLC8A1P32418 973 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 CD70P32970 193 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 LEPRP48357 1165 aaKnown RBP9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ARFIP2P53365 341 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 RAB10P61026 200 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 NTHL1P78549 312 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 ACVR1Q04771 509 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 LMAN2Q12907 356 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 DLG1Q12959 904 aa9.23□□□□□ -0.93
ATG4A-202ENST00000345734 BNIP1Q12981 228 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms