RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 ECT2LQ008S8 904 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 ELAVL2Q12926 359 aaKnown RBP16.34■□□□□ 0.21
RDX-201ENST00000343115 ACAP2Q15057 778 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 ZNF621Q6ZSS3 439 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 GLMNQ92990 594 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 SPATA31D3P0C874 917 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 TTPAP49638 278 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 VARS2Q5ST30 1063 aaKnown RBP16.34■□□□□ 0.21
RDX-201ENST00000343115 GDF6Q6KF10 455 aaPredicted RBP16.34■□□□□ 0.21
RDX-201ENST00000343115 PAQR3Q6TCH7 311 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 AFTPHQ6ULP2 937 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 SPATA31D4Q6ZUB0 917 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 C11orf74Q86VG3 221 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 CPNE9Q8IYJ1 553 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 MED8Q96G25 268 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 PHF12Q96QT6 1004 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 HS3ST4Q9Y661 456 aa16.34■□□□□ 0.21
RDX-201ENST00000343115 DCLK1O15075 740 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 DUSP11O75319 330 aaKnown RBP16.33■□□□□ 0.21
RDX-201ENST00000343115 PKMP14618 531 aaKnown RBP16.33■□□□□ 0.21
RDX-201ENST00000343115 PSMB9P28065 219 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 POU1F1P28069 291 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 GGT5P36269 586 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 HK2P52789 917 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 CDH15P55291 814 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 CRY1Q16526 586 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 CEP97Q8IW35 865 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 SELENOMQ8WWX9 145 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 FOPNLQ96NB1 174 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 RERGLQ9H628 205 aa16.33■□□□□ 0.21
RDX-201ENST00000343115 POLR3HQ9Y535 204 aaPredicted RBP16.33■□□□□ 0.21
RDX-201ENST00000343115 FAM189A1O60320 539 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 TBL1XO60907 577 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 OR6B1O95007 311 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 OR4F21O95013 312 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 NDST3O95803 873 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 GSNP06396 782 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 PRDX6P30041 224 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 FBXL22Q6P050 247 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 OR2T34Q8NGX1 318 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 OR2T3Q8NH03 318 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 DACT3Q96B18 629 aaPredicted RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 MRPS26Q9BYN8 205 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 C1orf21Q9H246 121 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 RIBC2Q9H4K1 309 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 EIF2B4Q9UI10 523 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 FADS3Q9Y5Q0 445 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 SOCS7O14512 581 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 ULK1O75385 1050 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 CNPP09543 421 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 MTHFD1P11586 935 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 RAD23AP54725 363 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 NUP107P57740 925 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 DCTN2Q13561 401 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 TMCO5AQ8N6Q1 288 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 SMG8Q8ND04 991 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 ACVR1CQ8NER5 493 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 ARNTL2Q8WYA1 636 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 TPD52L3Q96J77 140 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 CDK15Q96Q40 435 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 TMEM161AQ9NX61 479 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 IDO1P14902 403 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 TACR2P21452 398 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 NR4A1P22736 598 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 S100A3P33764 101 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 PRIM2P49643 509 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 MLLT6P55198 1093 aaPredicted RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 C11orf96Q7Z7L8 435 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 TMEM135Q86UB9 458 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 CPSF7Q8N684 471 aaKnown RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 VPS37AQ8NEZ2 397 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 RTP4Q96DX8 246 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 KCNA7Q96RP8 456 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 GORASP1Q9BQQ3 440 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 FAM126AQ9BYI3 521 aaPredicted RBP16.33■□□□□ 0.2
RDX-201ENST00000343115 PNPLA3Q9NST1 481 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 EURLQ9NYK6 297 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 FKBPLQ9UIM3 349 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 SLC13A4Q9UKG4 626 aa16.33■□□□□ 0.2
RDX-201ENST00000343115 DNAJC25-GNG10A0A024R161 153 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 PTGESO14684 152 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 AURKAO14965 403 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 SNNO75324 88 aaPredicted RBP16.32■□□□□ 0.2
RDX-201ENST00000343115 BCL10O95999 233 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 LRG1P02750 347 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 TUFMP49411 452 aaKnown RBP16.32■□□□□ 0.2
RDX-201ENST00000343115 NIPAL4Q0D2K0 466 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 PPP1R8Q12972 351 aaKnown RBP16.32■□□□□ 0.2
RDX-201ENST00000343115 BPIFB6Q8NFQ5 453 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 BTBD9Q96Q07 612 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 RAI2Q9Y5P3 530 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 SF3B1O75533 1304 aaKnown RBP eCLIP16.32■□□□□ 0.22e-6■■■■■ 103.4
RDX-201ENST00000343115 MLYCDO95822 493 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 C1RP00736 705 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 GALK1P51570 392 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 PTCD2Q8WV60 388 aaKnown RBP16.32■□□□□ 0.2
RDX-201ENST00000343115 SPATA16Q9BXB7 569 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 PGAP2Q9UHJ9 254 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 NUP205Q92621 2012 aa16.32■□□□□ 0.2
RDX-201ENST00000343115 NPHS1O60500 1241 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms