RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 H0YGN5 161 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PEX1O43933 1283 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SHBGP04278 402 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SERPINA6P08185 405 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 S100GP29377 79 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SSR2P43308 183 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 HCAR3P49019 387 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 CCR4P51679 360 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ACLYP53396 1101 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 LILRA4P59901 499 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 FSTL1Q12841 308 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 BLMHQ13867 455 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 UGCGQ16739 394 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 DGUOKQ16854 277 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 XKR4Q5GH76 650 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 MTX3Q5HYI7 312 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 AAGABQ6PD74 315 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 KRT74Q7RTS7 529 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 XYLT1Q86Y38 959 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 IFNL1Q8IU54 200 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 KREMEN2Q8NCW0 462 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PIK3C3Q8NEB9 887 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 HDAC10Q969S8 669 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 RAD51AP1Q96B01 352 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 LINGO1Q96FE5 620 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 MRPL45Q9BRJ2 306 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 NUSAP1Q9BXS6 441 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 LRMDAQ9H2I8 198 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 AGO3Q9H9G7 860 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 FANCFQ9NPI8 374 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 INTS10Q9NVR2 710 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 THUMPD1Q9NXG2 353 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 CCDC167Q9P0B6 97 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SAMD4AQ9UPU9 718 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 NFS1Q9Y697 457 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 KCNU1A8MYU2 1149 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 E9PAM4 449 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 NEDD8-MDP1E9PL57 170 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 TREHO43280 583 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 DCXO43602 365 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 TSPAN19P0C672 248 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PRPS2P11908 318 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PTGER3P43115 390 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 STXBP1P61764 594 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PDGFRLQ15198 375 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 OASLQ15646 514 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 VARS2Q5ST30 1063 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 TRIQKQ629K1 86 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 UBE2R2Q712K3 238 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 OTOP3Q7RTS5 596 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 AZIN2Q96A70 460 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 FBXO6Q9NRD1 293 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 DUS2Q9NX74 493 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ETAA1Q9NY74 926 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 GMIPQ9P107 970 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 CRNNQ9UBG3 495 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ADGRE2Q9UHX3 823 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 RAI2Q9Y5P3 530 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 IGLV3-22A0A075B6J6 115 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 GSAPA4D1B5 854 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 GTPBP1O00178 669 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 DDX3YO15523 660 aaKnown RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 DAOAP59103 153 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PLIN5Q00G26 463 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ANGPT1Q15389 498 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ARSHQ5FYA8 562 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 C1orf127Q8N9H9 656 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 CLEC4DQ8WXI8 215 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 HERVK_113Q902F9 699 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SEC14L1Q92503 715 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 MIR1-1HGQ9H1L0 117 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 ZNF214Q9UL59 606 aaPredicted RBP7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 CDC14AQ9UNH5 594 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SLC27A5Q9Y2P5 690 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 SESN1Q9Y6P5 492 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 RGPD2P0DJD1 1756 aa7.7□□□□□ -1.18
ATP2B4-201ENST00000341360 GABRDO14764 452 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 DHX15O43143 795 aaKnown RBP7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 PI15O43692 258 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 USP12O75317 370 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 STK16O75716 305 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 GJB6O95452 261 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 C22orf31O95567 290 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 BCL10O95999 233 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 SRPRAP08240 638 aaKnown RBP7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 DNAJB1P25685 340 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 CRATP43155 626 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 GNPDA1P46926 289 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 GRIA4P48058 902 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 DGKGP49619 791 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 JAM2P57087 298 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 KCNJ2P63252 427 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 TMEM44Q2T9K0 475 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 TIGD5Q53EQ6 642 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 SPANXN2Q5MJ10 180 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 NIPAL1Q6NVV3 410 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 ZBTB2Q8N680 514 aa7.69□□□□□ -1.18
ATP2B4-201ENST00000341360 ZSCAN18Q8TBC5 510 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms