RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 USP12O75317 370 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 MT-CO1P00395 513 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 AHSGP02765 367 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 PROCP04070 461 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 ENO2P09104 434 aaPredicted RBP7.15□□□□□ -1.26
NUP43-201ENST00000340413 ERVK-10P10266 1014 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 ACRV1P26436 265 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 KIR2DL1P43626 348 aaPredicted RBP7.15□□□□□ -1.26
NUP43-201ENST00000340413 SPINT3P49223 89 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 CDKL1Q00532 357 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 PEX6Q13608 980 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 SEPT6Q14141 434 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 BCL7AQ4VC05 210 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 FNDC3BQ53EP0 1204 aaKnown RBP7.15□□□□□ -1.26
NUP43-201ENST00000340413 SH2D4BQ5SQS7 431 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 HHATQ5VTY9 493 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 PHC3Q8NDX5 983 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 HDAC10Q969S8 669 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 SERAC1Q96JX3 654 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 LENG8Q96PV6 779 aaPredicted RBP7.15□□□□□ -1.26
NUP43-201ENST00000340413 PLA2G2FQ9BZM2 168 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 ZCCHC2Q9C0B9 1178 aaKnown RBP7.15□□□□□ -1.26
NUP43-201ENST00000340413 BRD9Q9H8M2 597 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 UBP1Q9NZI7 540 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 BCCIPQ9P287 314 aaKnown RBP eCLIP7.15□□□□□ -1.26
NUP43-201ENST00000340413 VWA7Q9Y334 891 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 PCDHB9Q9Y5E1 797 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 NUMBLQ9Y6R0 609 aa7.15□□□□□ -1.26
NUP43-201ENST00000340413 GLYATL1P3A0A0U1RQE8 302 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 SPECC1L-ADORA2AF8WAN1 911 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 SLCO1B7G3V0H7 640 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 KLK8O60259 260 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 PLIN3O60664 434 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 ALDH3A1P30838 453 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 NSG1P42857 185 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 CTSOP43234 321 aaPredicted RBP7.15□□□□□ -1.27
NUP43-201ENST00000340413 CHRNA4P43681 627 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 SLC12A2P55011 1212 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 RALGDSQ12967 914 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 ADGRE1Q14246 886 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 GALNT3Q14435 633 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 SEPT7Q16181 437 aaKnown RBP7.15□□□□□ -1.27
NUP43-201ENST00000340413 FAM83EQ2M2I3 478 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 ZNF470Q6ECI4 717 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 PARM1Q6UWI2 310 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 ADAMTSL4Q6UY14 1074 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 LINGO4Q6UY18 593 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 ZYG11AQ6WRX3 759 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 C12orf40Q86WS4 652 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 RASGRP3Q8IV61 690 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 BLOC1S5Q8TDH9 187 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 LRRN4Q8WUT4 740 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 DNAJC1Q96KC8 554 aaKnown RBP7.15□□□□□ -1.27
NUP43-201ENST00000340413 LINC00615Q96LM1 132 aaPredicted RBP7.15□□□□□ -1.27
NUP43-201ENST00000340413 RMI1Q9H9A7 625 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 TAS2R13Q9NYV9 303 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 DUSP12Q9UNI6 340 aa7.15□□□□□ -1.27
NUP43-201ENST00000340413 C19orf67A6NJJ6 358 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 CFAP99D6REC4 459 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 TPP1O14773 563 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 VPS26AO75436 327 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 SRP72O76094 671 aaKnown RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 BPGMP07738 259 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 LTA4HP09960 611 aaKnown RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 TYK2P29597 1187 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 NTSR1P30989 418 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 GRSF1Q12849 480 aaKnown RBP eCLIP7.14□□□□□ -1.27
NUP43-201ENST00000340413 PDE1CQ14123 709 aaPredicted RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 ARHGEF7Q14155 803 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 PLEKHS1Q5SXH7 462 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 ATXN7L2Q5T6C5 722 aaPredicted RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 HECTD2Q5U5R9 776 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 FAM91A1Q658Y4 838 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 TXNDC11Q6PKC3 985 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 MICALCLQ6ZW33 695 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 ERN2Q76MJ5 926 aaKnown RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 GJD3Q8N144 294 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 NETO2Q8NC67 525 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 OR4K2Q8NGD2 314 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 HLA-CQ95604 372 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 FAM129BQ96TA1 746 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 C1QTNF7Q9BXJ2 289 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 EBF3Q9H4W6 596 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 RDH14Q9HBH5 336 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 MRPS17Q9Y2R5 130 aaKnown RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 PCDHGC4Q9Y5F7 938 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 C16orf96A6NNT2 1141 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 GAPDHSO14556 408 aaPredicted RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 ATG13O75143 517 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 RALBP11234 206 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 PKMP14618 531 aaKnown RBP7.14□□□□□ -1.27
NUP43-201ENST00000340413 TPH1P17752 444 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 TAC1P20366 129 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 MC4RP32245 332 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 CTHP32929 405 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 SLCO1A2P46721 670 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 GNGT1P63211 74 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 NFATC2Q13469 925 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 AAK1Q2M2I8 961 aa7.14□□□□□ -1.27
NUP43-201ENST00000340413 TTLL9Q3SXZ7 439 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms