RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 TSACCQ96A04 125 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 WDR92Q96MX6 357 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 WDR24Q96S15 920 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 AGAP2Q99490 1192 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 RIOK2Q9BVS4 552 aaKnown RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 TEX101Q9BY14 249 aa15.2■□□□□ 0.02
UBE3B-201ENST00000340074 TCEAL2Q9H3H9 227 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 TTC7AQ9ULT0 858 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 DRG1Q9Y295 367 aaKnown RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 GOLGA4Q13439 2230 aaKnown RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 ARHGEF17Q96PE2 2063 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-201ENST00000340074 SPTBN2O15020 2390 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 RGSL1A5PLK6 1076 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 TMEM202A6NGA9 273 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 H3BM21 787 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 ZNF185O15231 689 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 MYCLP1P12525 358 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-201ENST00000340074 DGKAP23743 735 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 ACTN2P35609 894 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 KCNJ1P48048 391 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 KIAA1024LP59773 190 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 CDK3Q00526 305 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 PPARDQ03181 441 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 ALG11Q2TAA5 492 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 INAVAQ3KP66 663 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 KCTD11Q693B1 232 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 NLRP8Q86W28 1048 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 HID1Q8IV36 788 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 PHACTR4Q8IZ21 702 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 C17orf53Q8N3J3 647 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-201ENST00000340074 SLC25A45Q8N413 288 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 EID2Q8N6I1 236 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 CCDC89Q8N998 374 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 GLIS1Q8NBF1 620 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 BAHD1Q8TBE0 780 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-201ENST00000340074 BLOC1S5Q8TDH9 187 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 TBL1YQ9BQ87 522 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 FAM83DQ9H4H8 585 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 BPIFA1Q9NP55 256 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 PHPT1Q9NRX4 125 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-201ENST00000340074 HOMER3Q9NSC5 361 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 SMARCAL1Q9NZC9 954 aa15.19■□□□□ 0.02
UBE3B-201ENST00000340074 PGRMC1O00264 195 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 ZSCAN5DPP0CG00 497 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 TEAD1P28347 426 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 HMGCLP35914 325 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 HK3P52790 923 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 SRP54P61011 504 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 TRIP6Q15654 476 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 HENMT1Q5T8I9 393 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 KCTD16Q68DU8 428 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 RD3Q7Z3Z2 195 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 TTC30BQ8N4P2 665 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 PDCD7Q8N8D1 485 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 GPR26Q8NDV2 337 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 ZNF548Q8NEK5 533 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 OR56A4Q8NGH8 313 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 ATL2Q8NHH9 583 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 BTN2A2Q8WVV5 523 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 SLC13A1Q9BZW2 595 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 TRABDQ9H4I3 376 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 ETNK1Q9HBU6 452 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 FGF22Q9HCT0 170 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 MRPL40Q9NQ50 206 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 KCND1Q9NSA2 647 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 HACD3Q9P035 362 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 KLQ9UEF7 1012 aa15.18■□□□□ 0.02
UBE3B-201ENST00000340074 APOBEC3BQ9UH17 382 aaKnown RBP15.18■□□□□ 0.02
UBE3B-201ENST00000340074 SPAARA0A1B0GVQ0 90 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 FADS2P1A8MWK0 482 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PDE2AO00408 941 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 CES2O00748 559 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 SCAMP1O15126 338 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 FFAR2O15552 330 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PYGLP06737 847 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 BPIP17213 487 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 KELP23276 732 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 BLKP51451 505 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 KCTD19Q17RG1 926 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PRRT3Q5FWE3 981 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 ALS2CLQ60I27 953 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 DENND5AQ6IQ26 1287 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 ADAMTSL4Q6UY14 1074 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 GSTA5Q7RTV2 222 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 GLT6D1Q7Z4J2 308 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 ACTRT1Q8TDG2 376 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 OR1E3Q8WZA6 343 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 LRRC45Q96CN5 670 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PDXPQ96GD0 296 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 NAP1L3Q99457 506 aaPredicted RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 LRRC61Q9BV99 259 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 LRRC40Q9H9A6 602 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 CACNA1AO00555 2505 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 TNFRSF10CO14798 259 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 INPP4BO15327 924 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 PSMD3O43242 534 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 AQP9O43315 295 aa15.17■□□□□ 0.02
UBE3B-201ENST00000340074 BUD23O43709 281 aaKnown RBP15.17■□□□□ 0.02
UBE3B-201ENST00000340074 RASGRP1O95267 797 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms