RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 IFNEQ86WN2 208 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 CHCHD4Q8N4Q1 142 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 MCUQ8NE86 351 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 AGBL3Q8NEM8 1001 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 SECISBP2Q96T21 854 aaKnown RBP9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 NAT9Q9BTE0 207 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 AGPAT4Q9NRZ5 378 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 AGPAT3Q9NRZ7 376 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 EHD3Q9NZN3 535 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 KLHL20Q9Y2M5 609 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 ACTL7AQ9Y615 435 aa9.65□□□□□ -0.87
PTCHD4-201ENST00000339488 TRBV23-1A0A0A0MS06 115 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PIPSLA2A3N6 862 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 HMX3A6NHT5 357 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 GPR25O00155 361 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 BTN3A3O00478 584 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PTP4A3O75365 173 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 KRT19P08727 400 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 DSG3P32926 999 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CLCN7P51798 805 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FAM182BQ5T319 152 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 INTS11Q5TA45 600 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 IL31Q6EBC2 164 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PHF10Q8WUB8 498 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ST8SIA4Q92187 359 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF512BQ96KM6 892 aaPredicted RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FOPNLQ96NB1 174 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SEPHS2Q99611 448 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 C9orf16Q9BUW7 83 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ASPSCR1Q9BZE9 553 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 NUAK2Q9H093 628 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 UPF3AQ9H1J1 476 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZDHHC4Q9NPG8 344 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FBXO28Q9NVF7 368 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ASNSD1Q9NWL6 643 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SIRT5Q9NXA8 310 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 RGS17Q9UGC6 210 aaPredicted RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 AGTPBP1Q9UPW5 1226 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 INVSQ9Y283 1065 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 BTBD3Q9Y2F9 522 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SNX5Q9Y5X3 404 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CACNG2Q9Y698 323 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 TANC1Q9C0D5 1861 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 hCG_1818297A0A087WSY0 165 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 A0A1W2PRG6 482 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 HNRNPCL2B2RXH8 293 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 H3BQ06 376 aaPredicted RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 OR2B3O76000 313 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CHRNA1P02708 482 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CSF2P04141 144 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 IFNA16P05015 189 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ADORA3P0DMS8 318 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PHKG2P15735 406 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FASP25445 335 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 KCNC1P48547 511 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FAPQ12884 760 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SP140Q13342 867 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 GPR50Q13585 617 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 KCNJ11Q14654 390 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 TPRG1LQ5T0D9 272 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 KIAA1841Q6NSI8 718 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 COMMD7Q86VX2 200 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 P2RY8Q86VZ1 359 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ABI1Q8IZP0 508 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PLD6Q8N2A8 252 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 YIPF7Q8N8F6 280 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PIK3C3Q8NEB9 887 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZFAND1Q8TCF1 268 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZFPM2Q8WW38 1151 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 SLC7A6Q92536 515 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 FAF2Q96CS3 445 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 VPS39Q96JC1 886 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CAMKK2Q96RR4 588 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 BCL7BQ9BQE9 202 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PITHD1Q9GZP4 211 aaPredicted RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 PIF1Q9H611 641 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 CYP3A43Q9HB55 503 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZBTB26Q9HCK0 441 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 IFT46Q9NQC8 304 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 TBC1D13Q9NVG8 400 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 TSR3Q9UJK0 312 aaKnown RBP9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 OGDHLQ9ULD0 1010 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 TBC1D24Q9ULP9 559 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 COPS3Q9UNS2 423 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF804BA4D1E1 1349 aa9.64□□□□□ -0.87
PTCHD4-201ENST00000339488 GOLGB1Q14789 3259 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ZNF99A8MXY4 864 aaPredicted RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 TRIM24O15164 1050 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 GREM1O60565 184 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 CST8O60676 142 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 FADS2O95864 444 aaKnown RBP9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 ITGAVP06756 1048 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 TCF3P15923 654 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 SMSP52788 366 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 OSTNP61366 133 aa9.63□□□□□ -0.87
PTCHD4-201ENST00000339488 NKX3-2P78367 333 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms