RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 C5orf58C9J3I9 102 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PRAMEF1O95521 474 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PRIM2P49643 509 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GATMP50440 423 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CACNA2D1P54289 1103 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PCLAFQ15004 111 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CNKSR3Q6P9H4 555 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 P3H2Q8IVL5 708 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ZNF778Q96MU6 729 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CYP2S1Q96SQ9 504 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM79Q9BSE2 394 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TLL1O43897 1013 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PRMT3O60678 531 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SH3BGRLO75368 114 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FAM58BPP0C7Q3 252 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ACSM2AQ08AH3 577 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SETMARQ53H47 684 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ACSM2BQ68CK6 577 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 DNAJC14Q6Y2X3 702 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NECAB2Q7Z6G3 386 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 STK32CQ86UX6 486 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ZC3HC1Q86WB0 502 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 LINC01465Q8N7H1 131 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SUSD6Q92537 303 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ACDQ96AP0 544 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 KIFC1Q9BW19 673 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 MTMR10Q9NXD2 777 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CDH22Q9UJ99 828 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 MAFKO60675 156 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 OAZ2O95190 189 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 S100A3P33764 101 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CYP51A1Q16850 503 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 AFF1P51825 1210 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CYP4F8P98187 520 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 RING1Q06587 406 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FNDC3BQ53EP0 1204 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TRNP1Q6NT89 227 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 RBM23Q86U06 439 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM135Q86UB9 458 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ABCG8Q9H221 673 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TMCO1Q9UM00 188 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PCNAP12004 261 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 OGNP20774 298 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 IL4RP24394 825 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 MOGSQ13724 837 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SKIV2LQ15477 1246 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 MAPKAPK3Q16644 382 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 OTUD3Q5T2D3 398 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 RPL10LQ96L21 214 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 OR52B2Q96RD2 323 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 KCTD14Q9BQ13 255 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SIRPGQ9P1W8 387 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GJD2Q9UKL4 321 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 DYRK1BQ9Y463 629 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ARL5AQ9Y689 179 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GLYATL1P3A0A0U1RQE8 302 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 STK25O00506 426 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NPHS1O60500 1241 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 DLDP09622 509 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ACRP10323 421 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TAF1AQ15573 450 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 AMIGO2Q86SJ2 522 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GPR180Q86V85 440 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FIG4Q92562 907 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 VPS33AQ96AX1 596 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 THAP11Q96EK4 314 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PTCD3Q96EY7 689 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NPAS2Q99743 824 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 CCT7Q99832 543 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TNKS2Q9H2K2 1166 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TRIM45Q9H8W5 580 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PLCH1Q4KWH8 1693 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 M0QZQ0 153 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 UBXN8O00124 270 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 IFRD1O00458 451 aaPredicted RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TBC1D4O60343 1298 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ACVRL1P37023 503 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PTGER3P43115 390 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NRF1Q16656 503 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 TMEM248Q9NWD8 314 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SLC7A8Q9UHI5 535 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 BLOC1S6Q9UL45 172 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ASB3Q9Y575 518 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 STRCP1A6NGW2 1772 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ILVBLA1L0T0 632 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PDZK1P1A8MUH7 402 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 GRM6O15303 877 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NRP2O60462 931 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 ITGB1P05556 798 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 FCGR1AP12314 374 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 IDO1P14902 403 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 VCLP18206 1134 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 RPL38P63173 70 aaKnown RBP6.28□□□□□ -1.4
PRKDC-202ENST00000338368 SLC9B1Q4ZJI4 515 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 LRRTM3Q86VH5 581 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 MAGEC3Q8TD91 643 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 PXYLP1Q8TE99 480 aa6.28□□□□□ -1.4
PRKDC-202ENST00000338368 NEDD8-MDP1E9PL57 170 aa6.27□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms