RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 SEPT6Q14141 434 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 MORF4L2Q15014 288 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 CCDC6Q16204 474 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 RNASEH2BQ5TBB1 312 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ANKRD22Q5VYY1 191 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 RAET1GQ6H3X3 334 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ESRP1Q6NXG1 681 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 C8orf74Q6P047 294 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 IL27RAQ6UWB1 636 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 GCNT7Q6ZNI0 430 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 RFLNAQ6ZTI6 216 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PTAR1Q7Z6K3 402 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 NAT8LQ8N9F0 302 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PPHLN1Q8NEY8 458 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 OR4K2Q8NGD2 314 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 DTX3LQ8TDB6 740 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 STYXQ8WUJ0 223 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SCAMP4Q969E2 229 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 EID2BQ96D98 161 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 DCBLD2Q96PD2 775 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PLEKHG4BQ96PX9 1271 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 RANBP9Q96S59 729 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 TRIM51Q9BSJ1 452 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 CARD6Q9BX69 1037 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SPATA16Q9BXB7 569 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 IL22Q9GZX6 179 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 GDF3Q9NR23 364 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PHPT1Q9NRX4 125 aaPredicted RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SEMA4GQ9NTN9 838 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PIH1D1Q9NWS0 290 aaKnown RBP11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 APPL1Q9UKG1 709 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SNX24Q9Y343 169 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 ARL5AQ9Y689 179 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 SLCO1B1Q9Y6L6 691 aa11.87□□□□□ -0.51
SPTLC1-202ENST00000337841 PATE3B3GLJ2 98 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 GOLGA8MH3BSY2 632 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 ARHGAP33O14559 1287 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 LDB2O43679 373 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 DFNA5O60443 496 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 WNT1P04628 370 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 SPAM1P38567 509 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 DRG2P55039 364 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 NXPH1P58417 271 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 DCDC1P59894 354 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 ALS2CLQ60I27 953 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 PDPK2PQ6A1A2 396 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 ADAMTSL4Q6UY14 1074 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 DCLK2Q8N568 766 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 TRAM1L1Q8N609 369 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 PLA2G15Q8NCC3 412 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 GPR26Q8NDV2 337 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 OR13H1Q8NG92 308 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 FAM122AQ96E09 287 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 LRRC1Q9BTT6 524 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 ZSCAN5AQ9BUG6 496 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 WDR26Q9H7D7 661 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 ERVMER34-1Q9H9K5 563 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 CAPN10Q9HC96 672 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 IL26Q9NPH9 171 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 NLE1Q9NVX2 485 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 NFKBIL1Q9UBC1 381 aaPredicted RBP11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 RIMKLBQ9ULI2 386 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 KCTD3Q9Y597 815 aa11.86□□□□□ -0.51
SPTLC1-202ENST00000337841 GLYATL1P3A0A0U1RQE8 302 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 MROH6A6NGR9 719 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 H0Y8X5 98 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 GFRA3O60609 400 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SEC31AO94979 1220 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 MGAT1P26572 445 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 RPL21P46778 160 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 ITGA8P53708 1063 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 TMPRSS15P98073 1019 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 CAV1Q03135 178 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 PDE1CQ14123 709 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 NUMA1Q14980 2115 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 CCDC38Q502W7 563 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 TSTD2Q5T7W7 516 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 HENMT1Q5T8I9 393 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 DUPD1Q68J44 220 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 HIBCHQ6NVY1 386 aaPredicted RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 CASC4Q6P4E1 433 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 CAND1Q86VP6 1230 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 PDIK1LQ8N165 341 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 OXR1Q8N573 874 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 ZNF398Q8TD17 642 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 PEX13Q92968 403 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 HIC2Q96JB3 615 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 GTPBP2Q9BX10 602 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 TEX101Q9BY14 249 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 DPH5Q9H2P9 285 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SMOC1Q9H4F8 434 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms