RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 POLD2P49005 469 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 STC1P52823 247 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 EPHB1P54762 984 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 RPL26P61254 145 aaKnown RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 CCL7P80098 99 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 IFI35P80217 286 aaPredicted RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SKOR1P84550 965 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ZBTB17Q13105 803 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SPIDRQ14159 915 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 FAM182AQ5T1J6 154 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 RAET1GQ6H3X3 334 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 IGF2-ASQ6U949 168 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ADAMTSL4Q6UY14 1074 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 LRRC69Q6ZNQ3 347 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 TC2NQ8N9U0 490 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 LPCAT1Q8NF37 534 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 AP2M1Q96CW1 435 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 PRR11Q96HE9 360 aaPredicted RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ZNF830Q96NB3 372 aaPredicted RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SLC46A1Q96NT5 459 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 LYSMD1Q96S90 227 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 TRIM5Q9C035 493 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 DPEP2Q9H4A9 486 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 CARS2Q9HA77 564 aaKnown RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 PCDH9Q9HC56 1237 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ASCL3Q9NQ33 180 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SPATS2LQ9NUQ6 558 aaKnown RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 TRNAU1APQ9NX07 287 aaKnown RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 GOLGA6AQ9NYA3 693 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 APPL1Q9UKG1 709 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SUFUQ9UMX1 484 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 RPL26L1Q9UNX3 145 aaKnown RBP11.18□□□□□ -0.62
C9orf85-201ENST00000334731 SATB2Q9UPW6 733 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 ST14Q9Y5Y6 855 aa11.18□□□□□ -0.62
C9orf85-201ENST00000334731 PMS2P1A4D2B8 440 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 CAPN8A6NHC0 703 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 B4DGG1 531 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 ANKRD66B4E2M5 251 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 CLDN7O95471 211 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 KRT1P04264 644 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 FGF1P05230 155 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 RPLP0P05388 317 aaKnown RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 TNNT1P13805 278 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 PNLIPP16233 465 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 GLB1P16278 677 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 COMTP21964 271 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 CD86P42081 329 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 MAGEA1P43355 309 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 GNPDA1P46926 289 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 ERVPABLB-1P60509 514 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 CCDC173Q0VFZ6 552 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 AP1B1Q10567 949 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 HLTFQ14527 1009 aaKnown RBP eCLIP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 PDK1Q15118 436 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 QPCTQ16769 361 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 C14orf28Q4W4Y0 310 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 C3orf38Q5JPI3 329 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 MFSD7Q6UXD7 560 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 NPNTQ6UXI9 565 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 ZNF765Q7L2R6 523 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 C17orf82Q86X59 251 aaPredicted RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 RHOT1Q8IXI2 618 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 NRSN1Q8IZ57 195 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 Q8N9G6 341 aaPredicted RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 WNT2BQ93097 391 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 SCARF2Q96GP6 870 aaPredicted RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 OLFM3Q96PB7 478 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 GFM1Q96RP9 751 aaKnown RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 AGAP2Q99490 1192 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 MLPHQ9BV36 600 aaPredicted RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 RIOK2Q9BVS4 552 aaKnown RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 GSDMCQ9BYG8 508 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 SUDS3Q9H7L9 328 aaPredicted RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 SYNDIG1Q9H7V2 258 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 DDX56Q9NY93 547 aaKnown RBP11.17□□□□□ -0.62
C9orf85-201ENST00000334731 LRIT1Q9P2V4 623 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 DNPEPQ9ULA0 475 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 TMEM98Q9Y2Y6 226 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 PCDHGA8Q9Y5G5 932 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 ALG6Q9Y672 507 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 RNF215Q9Y6U7 377 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 ASXL3Q9C0F0 2248 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 CACNA1GO43497 2377 aa11.17□□□□□ -0.62
C9orf85-201ENST00000334731 LRRK1Q38SD2 2015 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 ADAMTS20P59510 1910 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
C9orf85-201ENST00000334731 LCA5LO95447 670 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 PYGLP06737 847 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 IVLP07476 585 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 ZFXP17010 805 aaPredicted RBP11.16□□□□□ -0.62
C9orf85-201ENST00000334731 AK4P27144 223 aaPredicted RBP11.16□□□□□ -0.62
C9orf85-201ENST00000334731 RBMS1P29558 406 aaKnown RBP11.16□□□□□ -0.62
C9orf85-201ENST00000334731 ADCY8P40145 1251 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 CDKN2BP42772 138 aa11.16□□□□□ -0.62
C9orf85-201ENST00000334731 NOP2P46087 812 aaKnown RBP11.16□□□□□ -0.62
C9orf85-201ENST00000334731 HADHBP55084 474 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms