RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 USP18Q9UMW8 372 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 TNPO3Q9Y5L0 923 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MYO3AQ8NEV4 1616 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 C12orf71A8MTZ7 269 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 CYP1A1P04798 512 aaPredicted RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 SPIBQ01892 262 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PLEKHG7Q6ZR37 379 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 PTCHD4Q6ZW05 846 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 COMTD1Q86VU5 262 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 MCOLN3Q8TDD5 553 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 TPK1Q9H3S4 243 aa10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 DDX43Q9NXZ2 648 aaKnown RBP10.33□□□□□ -0.76
SPTBN1-201ENST00000333896 FABP12A6NFH5 140 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 FADS2O95864 444 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 DNTTP04053 509 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 NAT1P18440 290 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 IMPDH1P20839 514 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 FAM98CQ17RN3 349 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PLA2G4EQ3MJ16 856 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ANGEL2Q5VTE6 544 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF548Q8NEK5 533 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 UCMAQ8WVF2 138 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 HYLS1Q96M11 299 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CEP295NLQ96MC4 621 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TREM1Q9NP99 234 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 GFOD1Q9NXC2 390 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PP2D1A8MPX8 630 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 NARSO43776 548 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TUBG1P23258 451 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PPIBP23284 216 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 MTHFRP42898 656 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PRMT2P55345 433 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 RC3H2Q9HBD1 1191 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 SNTG2Q9NY99 539 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 POLR3HQ9Y535 204 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TBX10O75333 385 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 FBXO21O94952 628 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 GADD45AP24522 165 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 WEE1P30291 646 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ASMTP46597 345 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 GEMP55040 296 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 IL27RAQ6UWB1 636 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TRMT11Q7Z4G4 463 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TEFMQ96QE5 360 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 UNKLQ9H9P5 680 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 IGSF9BQ9UPX0 1349 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TNFRSF10AO00220 468 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 NUAK1O60285 661 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 AP2A2O94973 939 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 GRIA1P42261 906 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CBLBQ13191 982 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 LILRB4Q8NHJ6 448 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TRPM4Q8TD43 1214 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 GGA3Q9NZ52 723 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 MAU2Q9Y6X3 613 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PSMD9O00233 223 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ENDOD1O94919 500 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 UPP2O95045 317 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ANXA3P12429 323 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CYP11B1P15538 503 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 BMP7P18075 431 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 HNRNPH3P31942 346 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 HSDL1Q3SXM5 330 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 DCP2Q8IU60 420 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 NKD1Q969G9 470 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 RTFDC1Q9BY42 306 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 JPH1Q9HDC5 661 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TAS2R9Q9NYW1 312 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CNOT11Q9UKZ1 510 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PLLPQ9Y342 182 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PCDHA11Q9Y5I1 949 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ABCA6Q8N139 1617 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ANKDD1BA6NHY2 528 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ACADMP11310 421 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CRHR1P34998 444 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 MLLT6P55198 1093 aaPredicted RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 WSCD2Q2TBF2 565 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ATCAYQ86WG3 371 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TICAM1Q8IUC6 712 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 DNAJC10Q8IXB1 793 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 SLC4A11Q8NBS3 891 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TMEM121Q9BTD3 319 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF225Q9UK10 706 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ABHD14A-ACY1A0A1B0GW23 586 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PEX11AO75192 247 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 PROSCO94903 275 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ELK3P41970 407 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 MECP2P51608 486 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 UGT2B15P54855 530 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TAS2R41P59536 307 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 SEMA3AQ14563 771 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CBWD3Q5JTY5 395 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 CBWD5Q5RIA9 395 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 TDRD10Q5VZ19 366 aaKnown RBP10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF425Q6IV72 752 aa10.32□□□□□ -0.76
SPTBN1-201ENST00000333896 ZNF410Q86VK4 478 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms