RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GPR20Q99678 358 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 FUNDC2Q9BWH2 189 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-202ENST00000333611 SIK2Q9H0K1 926 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 RETREG1Q9H6L5 497 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 CYP3A43Q9HB55 503 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 LRRC4Q9HBW1 653 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PRMT7Q9NVM4 692 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PCDHB12Q9Y5F1 795 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 SLC30A1Q9Y6M5 507 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PRSS51A0A1B0GVH4 220 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 DFFAO00273 331 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 STMN1P16949 149 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 AZGP1P25311 298 aaKnown RBP11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PIGGQ5H8A4 983 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 RYBPQ8N488 228 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-202ENST00000333611 TOR1AIP2Q8NFQ8 470 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 ARNTL2Q8WYA1 636 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 VPS39Q96JC1 886 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 EMILIN2Q9BXX0 1053 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PDZD7Q9H5P4 517 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 PGAP2Q9UHJ9 254 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 ZDHHC2Q9UIJ5 367 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 COL11A2P13942 1736 aaPredicted RBP11.86□□□□□ -0.51
LIMK2-202ENST00000333611 CENPFP49454 3210 aa11.86□□□□□ -0.51
LIMK2-202ENST00000333611 ATP6V1G2-DDX39BF2Z307 99 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NUPL2O15504 423 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 SRP72O76094 671 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 TOMM70O94826 608 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 JCHAINP01591 159 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 BMP4P12644 408 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NCK1P16333 377 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 POLR2IP36954 125 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CAPRIN1Q14444 709 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 GRM3Q14832 879 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 RPS6KA2Q15349 733 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 DGUOKQ16854 277 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 PGAM4Q8N0Y7 254 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 MCFD2Q8NI22 146 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NDNFQ8TB73 568 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NXNL1Q96CM4 212 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 SIPA1Q96FS4 1042 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 KCTD14Q9BQ13 255 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 FZD8Q9H461 694 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 FAM96AQ9H5X1 160 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 C8orf4Q9NR00 106 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CACNG4Q9UBN1 327 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NUP205Q92621 2012 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 M0QX08 132 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ARHGEF9O43307 516 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 TFEBP19484 476 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 PSMA4P25789 261 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 GABRB3P28472 473 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 RPL14P50914 215 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 MCCD1P59942 119 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 GRM1Q13255 1194 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CCBE1Q6UXH8 406 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ESX1Q8N693 406 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 SHCBP1Q8NEM2 672 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ZNF420Q8TAQ5 688 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ACMSDQ8TDX5 336 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 PHF21BQ96EK2 531 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CEP19Q96LK0 163 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 MUS81Q96NY9 551 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CPNE1Q99829 537 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 VPS33BQ9H267 617 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 RMND5AQ9H871 391 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 LRRC40Q9H9A6 602 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 LOC100506127A0A0U1RQW1 187 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 H0Y626 953 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 MRASO14807 208 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 RGS5O15539 181 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 PGRP06401 933 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 MTHFD1P11586 935 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 LRPAP1P30533 357 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 PLA2G16P53816 162 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 OR2B6P58173 313 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 NIPAL4Q0D2K0 466 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 KCTD2Q14681 263 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 TAB1Q15750 504 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 EPGNQ6UW88 154 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 CATSPER4Q7RTX7 472 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 FAM35AQ86V20 835 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 DCP2Q8IU60 420 aaKnown RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 SCML4Q8N228 414 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 BEND7Q8N7W2 519 aaPredicted RBP11.85□□□□□ -0.51
LIMK2-202ENST00000333611 IPMKQ8NFU5 416 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 C14orf119Q9NWQ9 140 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 XPR1Q9UBH6 696 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 LY75O60449 1722 aa11.85□□□□□ -0.51
LIMK2-202ENST00000333611 ZBTB24O43167 697 aaPredicted RBP11.84□□□□□ -0.51
LIMK2-202ENST00000333611 SPNP16150 400 aa11.84□□□□□ -0.51
LIMK2-202ENST00000333611 DCKP27707 260 aa11.84□□□□□ -0.51
LIMK2-202ENST00000333611 TGFBR1P36897 503 aa11.84□□□□□ -0.51
LIMK2-202ENST00000333611 CASP3P42574 277 aa11.84□□□□□ -0.51
LIMK2-202ENST00000333611 TPI1P60174 286 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms