RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 TWIST2Q8WVJ9 160 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 ESAMQ96AP7 390 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 ATOH8Q96SQ7 321 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 Q9H521 79 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 FNIP2Q9P278 1114 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 EGFL7Q9UHF1 273 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 TIMM22Q9Y584 194 aa13.4□□□□□ -0.26
TUBA1B-201ENST00000332858 DRGXA6NNA5 263 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 SEPT4O43236 478 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 PBX3P40426 434 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 ACVR1Q04771 509 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 LSAMPQ13449 338 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 MAPRE2Q15555 327 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 TRIP4Q15650 581 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CTXN3Q4LDR2 81 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 DDIASQ8IXT1 998 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CATSPER1Q8NEC5 780 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 OR7D4Q8NG98 312 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 OR4L1Q8NH43 312 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 POLR1EQ9GZS1 481 aaKnown RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 SEMA4BQ9NPR2 832 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 UBA6A0AVT1 1052 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 NCF1BA6NI72 391 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 NCF1CA8MVU1 366 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 VNN2O95498 520 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 FAM58BPP0C7Q3 252 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 NCF1P14598 390 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 FMO4P31512 558 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 DIO3P55073 304 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CYTH1Q15438 398 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 FAM171A1Q5VUB5 890 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 ARMC3Q5W041 872 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 FATE1Q969F0 183 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 TEX37Q96LM6 180 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 SLC30A3Q99726 388 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 TRMOQ9BU70 441 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 CNOT6Q9ULM6 557 aaKnown RBP13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 PCDHB5Q9Y5E4 795 aa13.39□□□□□ -0.27
TUBA1B-201ENST00000332858 MANSC4A6NHS7 340 aaPredicted RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 AZIN1O14977 448 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 PRAMEF11O60813 436 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CLASP2O75122 1294 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SRP72O76094 671 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SLC6A4P31645 630 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 NFKB2Q00653 900 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ZNF235Q14590 738 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SCIMPQ6UWF3 145 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CHERPQ8IWX8 916 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 AHI1Q8N157 1196 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 GIPC2Q8TF65 315 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SEPT5Q99719 369 aaPredicted RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 FNDC3AQ9Y2H6 1198 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 COMMD3-BMI1R4GMX3 469 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SMIM31A0A1B0GVY4 71 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 FAM149AA5PLN7 773 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CDC7O00311 574 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 KIF3CO14782 793 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 RPP40O75818 363 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 TNFAIP8O95379 198 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 GFAPP14136 432 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CES1P23141 567 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SLC26A3P40879 764 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 AGTR2P50052 363 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 GATMP50440 423 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 PLXNA3P51805 1871 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 STC1P52823 247 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 NFE2Q16621 373 aaPredicted RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CROCCQ5TZA2 2017 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 KLHDC10Q6PID8 442 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 DCBLD1Q8N8Z6 715 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 BRSK1Q8TDC3 778 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 PPWD1Q96BP3 646 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 DGCR14Q96DF8 476 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ZNF696Q9H7X3 374 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 PDFQ9HBH1 243 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 CATSPERZQ9NTU4 200 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 IL37Q9NZH6 218 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 FXYD1O00168 92 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SOCS2O14508 198 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ENPP3O14638 875 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ELNP15502 786 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SLC7A1P30825 629 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ACADVLP49748 655 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 TSNQ15631 228 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SAMD4BQ5PRF9 694 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 MFSD14CQ5VZR4 134 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 DHFR2Q86XF0 187 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 SPPL2CQ8IUH8 684 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 MDGA1Q8NFP4 955 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 GABPB2Q8TAK5 448 aaPredicted RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 DIS3LQ8TF46 1054 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 TUBGCP3Q96CW5 907 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 ZNF597Q96LX8 424 aa13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 GPATCH1Q9BRR8 931 aaKnown RBP13.38□□□□□ -0.27
TUBA1B-201ENST00000332858 AARSD1Q9BTE6 412 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms