RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 LHPPQ9H008 270 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TKTL2Q9H0I9 626 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 EPS8L2Q9H6S3 715 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 MEAF6Q9HAF1 191 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TSR3Q9UJK0 312 aaKnown RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 TIMM22Q9Y584 194 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NCF1BA6NI72 391 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 NCF1CA8MVU1 366 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 FAM155AB1AL88 458 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 ZNF487B1APH4 448 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 HGFP14210 728 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NCF1P14598 390 aaPredicted RBP7.88□□□□□ -1.15
VMA21-201ENST00000330374 ARNTP27540 789 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TIE1P35590 1138 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 HK2P52789 917 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PYCR3Q53H96 274 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 CYBRD1Q53TN4 286 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 PCID2Q5JVF3 399 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 AGAP9Q5VTM2 703 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 ITIH5Q86UX2 942 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 ADGRG5Q8IZF4 528 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 APPL2Q8NEU8 664 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 BEST2Q8NFU1 509 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 NUDT8Q8WV74 236 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TOP1MTQ969P6 601 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 TEKT5Q96M29 485 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 IGSF5Q9NSI5 407 aa7.88□□□□□ -1.15
VMA21-201ENST00000330374 LDLRP01130 860 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 NFKBIAP25963 317 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SHMT2P34897 504 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ACADSBP45954 432 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CCT8P50990 548 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FPGSQ05932 587 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 PFKFB4Q16877 469 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FBXO47Q5MNV8 452 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 C10orf62Q5T681 223 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 PRR23BQ6ZRT6 265 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RAVER1Q8IY67 606 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 CHST13Q8NET6 341 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CASP10Q92851 521 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 KCNN1Q92952 543 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SEZ6LQ9BYH1 1024 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ARMC1Q9NVT9 282 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 NUDT5Q9UKK9 219 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ADAMTS5Q9UNA0 930 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 NOBOXO60393 691 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 LRIG2O94898 1065 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 DPEP1P16444 411 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MAGP20916 626 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RCVRNP35243 200 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 IDUAP35475 653 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 HADHAP40939 763 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 IL1RL1Q01638 556 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 PPIL2Q13356 520 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ATP6AP1Q15904 470 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TECRLQ5HYJ1 363 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TMTC4Q5T4D3 741 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TTC39CQ8N584 583 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CAMKK2Q96RR4 588 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 UHRF1Q96T88 793 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 NPY6RQ99463 290 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RHOBTB2Q9BYZ6 727 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 BRD8Q9H0E9 1235 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CCDC68Q9H2F9 335 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 RAD21L1Q9H4I0 556 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TUBA8Q9NY65 449 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 TCAF1Q9Y4C2 921 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CSADQ9Y600 493 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MCM3APO60318 1980 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ACOX3O15254 700 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 DYNC1LI2O43237 492 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 RECQL4O94761 1208 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MOCS2O96007 188 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 LTA4HP09960 611 aaKnown RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 GFAPP14136 432 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SLC6A2P23975 617 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 GSK3BP49841 420 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MAXP61244 160 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 LIPEQ05469 1076 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SPCS2Q15005 226 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TIGD2Q4W5G0 525 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 C9orf57Q5W0N0 161 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FAM45BPQ6NSW5 357 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CYHR1Q6ZMK1 362 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 ATCAYQ86WG3 371 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 HS3ST5Q8IZT8 346 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MIER2Q8N344 545 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 MFSD2AQ8NA29 543 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 TRPV3Q8NET8 790 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 FAM45AQ8TCE6 357 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 LRRC58Q96CX6 371 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 CSF3RQ99062 836 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 HBEGFQ99075 208 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 KIFC1Q9BW19 673 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 IRF2BPLQ9H1B7 796 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 WDCPQ9H6R7 721 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 SEMA4BQ9NPR2 832 aaPredicted RBP7.87□□□□□ -1.15
VMA21-201ENST00000330374 FAM86C1Q9NVL1 165 aa7.87□□□□□ -1.15
VMA21-201ENST00000330374 NSMCE4AQ9NXX6 385 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms