RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 FMO4P31512 558 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 OR1D2P34982 312 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 TUFMP49411 452 aaKnown RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 ATP4BP51164 291 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ADGRE1Q14246 886 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PFKFB4Q16877 469 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 MMEL1Q495T6 779 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PAQR3Q6TCH7 311 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 RAB44Q7Z6P3 723 aaPredicted RBP14.53□□□□□ -0.08
TPM3-206ENST00000330188 FAM156AQ8NDB6 213 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 DLG3Q92796 817 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ASB2Q96Q27 587 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ZBED2Q9BTP6 218 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 DERL2Q9GZP9 239 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 UNC93B1Q9H1C4 597 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 GKN1Q9NS71 199 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ADA2Q9NZK5 511 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 RIMS3Q9UJD0 308 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 DTNAQ9Y4J8 743 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 ASB3Q9Y575 518 aa14.53□□□□□ -0.08
TPM3-206ENST00000330188 PRSS51A0A1B0GVH4 220 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 E7ENX8 843 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 SEC24AO95486 1093 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 SNRPB2P08579 225 aaKnown RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 ALDOCP09972 364 aaKnown RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 ZCCHC18P0CG32 403 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 TCN1P20061 433 aaPredicted RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 ATXN3P54252 364 aaPredicted RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 RPL26P61254 145 aaKnown RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 CHST9Q7L1S5 443 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 LRRC43Q8N309 656 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 KIAA1191Q96A73 305 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 KLHL32Q96NJ5 620 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 NSUN5Q96P11 429 aaKnown RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 YIPF3Q9GZM5 350 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 CWH43Q9H720 699 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 SYTL2Q9HCH5 934 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 PDP2Q9P2J9 529 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 IKZF3Q9UKT9 509 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 AGO1Q9UL18 857 aaKnown RBP14.52□□□□□ -0.09
TPM3-206ENST00000330188 DNAJC15Q9Y5T4 150 aa14.52□□□□□ -0.09
TPM3-206ENST00000330188 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 A0A1B0GVM2 712 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 CAPN8A6NHC0 703 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TSPAN3O60637 253 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 KERAO60938 352 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 SRP72O76094 671 aaKnown RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 VCLP18206 1134 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 CDKN1CP49918 316 aaPredicted RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 ZNF177Q13360 481 aaPredicted RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 MED21Q13503 144 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 USP41Q3LFD5 358 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 RNF220Q5VTB9 566 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 PAOXQ6QHF9 649 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 C16orf59Q7L2K0 433 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TMEM126BQ8IUX1 230 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 LILRA2Q8N149 483 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 ICA1LQ8NDH6 482 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 LPCAT1Q8NF37 534 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 OR9I1Q8NGQ6 314 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 WBP2Q969T9 261 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 ASB9Q96DX5 294 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 DCUN1D1Q96GG9 259 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 BTBD9Q96Q07 612 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 SLC25A23Q9BV35 468 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 VN1R3Q9BXE9 311 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 AKTIPQ9H8T0 292 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 MID1IP1Q9NPA3 183 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TAS2R13Q9NYV9 303 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 SUCOQ9UBS9 1254 aaKnown RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 FAM50BQ9Y247 325 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 PCDHGC4Q9Y5F7 938 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 RAI2Q9Y5P3 530 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 BACE2Q9Y5Z0 518 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 ANAPC1Q9H1A4 1944 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 C2orf81A6NN90 581 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 CBX4O00257 560 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 MRASO14807 208 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 AZIN1O14977 448 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TRIM24O15164 1050 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 NRP2O60462 931 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 NDUFS3O75489 264 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 PIM1P11309 404 aaPredicted RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 GFAPP14136 432 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 GPX3P22352 226 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 FOXA1P55317 472 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 FOXB2Q5VYV0 432 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 KANK2Q63ZY3 851 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 CXorf57Q6NSI4 855 aaKnown RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 STAG3L4Q8TBR4 150 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TWIST2Q8WVJ9 160 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 LRGUKQ96M69 825 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 TCF12Q99081 682 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 RNF38Q9H0F5 515 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 CCDC68Q9H2F9 335 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 COPS7BQ9H9Q2 264 aaPredicted RBP14.51□□□□□ -0.09
TPM3-206ENST00000330188 TBC1D30Q9Y2I9 924 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 PTGDR2Q9Y5Y4 395 aa14.51□□□□□ -0.09
TPM3-206ENST00000330188 LCHNA4D1U4 455 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms