RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MCFD2Q8NI22 146 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 AGR3Q8TD06 166 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 CHURC1Q8WUH1 139 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 GIMAP1Q8WWP7 306 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TFAP2BQ92481 460 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 FCGR1BQ92637 280 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 HTRA1Q92743 480 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 KAT8Q9H7Z6 458 aaKnown RBP8.38□□□□□ -1.07
SKA2-201ENST00000330137 ACOXLQ9NUZ1 547 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 ERVW-1Q9UQF0 538 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TRAPPC4Q9Y296 219 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 TPRKBQ9Y3C4 175 aa8.38□□□□□ -1.07
SKA2-201ENST00000330137 SSC5DA1L4H1 1573 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 A0A1W2PQ67 120 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SLC1A7O00341 560 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 CCRL2O00421 344 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TNPO2O14787 897 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 PPEF1O14829 653 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 ANGPT2O15123 496 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 CAPN5O15484 640 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 PDPK1O15530 556 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 MFN2O95140 757 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PSAPP07602 524 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ERVK-10P10266 1014 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ITGA2P17301 1181 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 GNPDA1P46926 289 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 NPY2RP49146 381 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 NKX2-5P52952 324 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 MAPK10P53779 464 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 OR2B6P58173 313 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SLC13A2Q13183 592 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 GEN1Q17RS7 908 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TKFCQ3LXA3 575 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TIGD3Q6B0B8 471 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PAGE2Q7Z2X7 111 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SLC22A9Q8IVM8 553 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 FSTL5Q8N475 847 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 AMER2Q8N7J2 671 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PSD4Q8NDX1 1056 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SETD9Q8NE22 299 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 FIG4Q92562 907 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ELMO3Q96BJ8 720 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 NXNL1Q96CM4 212 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TMCO6Q96DC7 493 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 LGALS12Q96DT0 336 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 VPS39Q96JC1 886 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 RBM4BQ9BQ04 359 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 RBM4Q9BWF3 364 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 TMEM134Q9H6X4 195 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ABCB10Q9NRK6 738 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 MAP10Q9P2G4 905 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 RAPGEFL1Q9UHV5 662 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 MAGEL2Q9UJ55 1249 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PEX16Q9Y5Y5 336 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ZNF541Q9H0D2 1346 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 COL2A1P02458 1487 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 FAM149AA5PLN7 773 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 METTL15A6NJ78 407 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SNTNA6NMZ2 147 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 VPS4BO75351 444 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TRIM3O75382 744 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 UGT2B17O75795 530 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 CHRM3P20309 590 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SLC6A2P23975 617 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 GRIA1P42261 906 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 UGT2B15P54855 530 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SNX16P57768 344 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 CSNK2BP67870 215 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 EMX1Q04741 257 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 MFSD10Q14728 455 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ESCO2Q56NI9 601 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 FAM122CQ6P4D5 195 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 FAM160B2Q86V87 743 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PLD3Q8IV08 490 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PSTKQ8IV42 348 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 METTL4Q8N3J2 472 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 TTLL6Q8N841 843 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 COLGALT1Q8NBJ5 622 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 GALNT11Q8NCW6 608 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 LRRC58Q96CX6 371 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ST6GAL2Q96JF0 529 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 CEP19Q96LK0 163 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 SLC30A3Q99726 388 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 DUSP21Q9H596 190 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 DHX35Q9H5Z1 703 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 BFARQ9NZS9 450 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 C3orf18Q9UK00 162 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 INTS6Q9UL03 887 aaKnown RBP8.37□□□□□ -1.07
SKA2-201ENST00000330137 KIAA1257Q9ULG3 409 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 AP4E1Q9UPM8 1137 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ACOT9Q9Y305 439 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 PCDHGA8Q9Y5G5 932 aa8.37□□□□□ -1.07
SKA2-201ENST00000330137 ZCWPW2A0A1B0GU75 182 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 CCDC154A6NI56 674 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 TK2O00142 265 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 TSPAN9O75954 239 aa8.36□□□□□ -1.07
SKA2-201ENST00000330137 RAP2AP10114 183 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms